RNA–Protein interactions for RNA: YDR229W

IVY1, Transcript of Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, yeast

Gene IVY1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IVY1	YDR229W	BRR1	Q99177	341 aa	Predicted RBP	6.11	□□□□□ -1.43
IVY1	YDR229W	HIS3	P06633	220 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	RAD10	P06838	210 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	TUB3	P09734	445 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	SSC1	P0CS90	654 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
IVY1	YDR229W	EXO70	P19658	623 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	CLB3	P24870	427 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	HMX1	P32339	317 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	YKL077W	P36081	392 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	SLM4	P38247	162 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	IML3	P38265	245 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	YBR259W	P38338	688 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	DIA4	P38705	446 aa	Predicted RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	YHR097C	P38809	366 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
IVY1	YDR229W	MND2	P40577	368 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	TES1	P41903	349 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	YFR018C	P43599	363 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	BIR1	P47134	954 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	HXT16	P47185	567 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	GCV1	P48015	400 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	PAN2	P53010	1115 aa	Predicted RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	EGD1	Q02642	157 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	YDR239C	Q03780	787 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	GPI17	Q04080	534 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	PLB3	Q08108	686 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	NRT1	Q08485	598 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	SNX3	Q08826	162 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	ACM1	Q08981	209 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	PSY3	Q12318	242 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	RPS21B	Q3E754	87 aa	Known RBP	6.1	□□□□□ -1.43
IVY1	YDR229W	YBR126W-A	Q8TGU7	68 aa		6.1	□□□□□ -1.43
IVY1	YDR229W	SCL1	P21243	252 aa	Known RBP	6.09	□□□□□ -1.43
IVY1	YDR229W	EPT1	P22140	391 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	HSP30	P25619	332 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	RFA2	P26754	273 aa	Known RBP	6.09	□□□□□ -1.43
IVY1	YDR229W	PHO91	P27514	894 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	SPS19	P32573	292 aa	Known RBP	6.09	□□□□□ -1.43
IVY1	YDR229W	PHO11	P35842	467 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	PHO12	P38693	467 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	TIM17	P39515	158 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YAT2	P40017	923 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	SNL1	P40548	159 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	NAS2	P40555	220 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	ALY2	P47029	1046 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	UBC9	P50623	157 aa	Predicted RBP	6.09	□□□□□ -1.43
IVY1	YDR229W	MRM2	P53123	320 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	LCL3	P53153	274 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	NCE103	P53615	221 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	FRE4	P53746	719 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YDR476C	Q03362	224 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	DML1	Q03652	475 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YDR132C	Q03900	495 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YAP6	Q03935	383 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	RRT8	Q08219	342 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YPL278C	Q08990	100 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YDR018C	Q12185	396 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	YLR149C	Q99296	730 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	AI5_ALPHA	Q9ZZX1	630 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	MEC1	P38111	2368 aa		6.09	□□□□□ -1.43
IVY1	YDR229W	HEM15	P16622	393 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	DBP3	P20447	523 aa	Known RBP	6.08	□□□□□ -1.44
IVY1	YDR229W	YSP3	P25036	478 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	HIR2	P32480	875 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	EMC3	P36039	253 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	CUE2	P36075	443 aa	Known RBP	6.08	□□□□□ -1.44
IVY1	YDR229W	VHC1	P38329	1120 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	MSG5	P38590	489 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	TRM5	P38793	499 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	SPC97	P38863	823 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	END3	P39013	349 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	YAL037W	P39728	267 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	MAM33	P40513	266 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	EMC2	P47133	292 aa	Known RBP	6.08	□□□□□ -1.44
IVY1	YDR229W	ECL1	P48235	211 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	RAD30	Q04049	632 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	EMI1	Q04406	187 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	COA4	Q05809	96 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	RCN2	Q12044	265 aa		6.08	□□□□□ -1.44
IVY1	YDR229W	ATP12	P22135	325 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	VPS21	P36017	210 aa	Known RBP	6.07	□□□□□ -1.44
IVY1	YDR229W	GMH1	P36125	273 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	YBL029W	P38201	376 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	PEX32	P38292	413 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	TSC10	P38342	320 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	DBP8	P38719	431 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	PCL5	P38794	229 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	CYC2	P38909	366 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	YDR089W	P38966	869 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	SWD1	P39706	426 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	AST2	P39945	430 aa	Known RBP	6.07	□□□□□ -1.44
IVY1	YDR229W	NUP100	Q02629	959 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	RLI1	Q03195	608 aa	Known RBP	6.07	□□□□□ -1.44
IVY1	YDR229W	YMR160W	Q03823	816 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	SMP3	Q04174	516 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	VCX1	Q99385	411 aa		6.07	□□□□□ -1.44
IVY1	YDR229W	RPL6B	P05739	176 aa	Known RBP	6.06	□□□□□ -1.44
IVY1	YDR229W	CPA1	P07258	411 aa	Known RBP	6.06	□□□□□ -1.44
IVY1	YDR229W	CDC24	P11433	854 aa	Predicted RBP	6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms