RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SLC18A3Q16572 532 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 KCTD19Q17RG1 926 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-233ENST00000642021 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 HEXIM1O94992 359 aaKnown RBP15.22■□□□□ 0.03
PHGDH-233ENST00000642021 PLA2G4BP0C869 781 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 ACTN1P12814 892 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 STAT3P40763 770 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 GNGT1P63211 74 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 MEI1Q5TIA1 1274 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
PHGDH-233ENST00000642021 KRT12Q99456 494 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 EPB41P11171 864 aaKnown RBP15.22■□□□□ 0.03
PHGDH-233ENST00000642021 CYP11B2P19099 503 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 CASP5P51878 434 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 GTF2IP78347 998 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 ADAM9Q13443 819 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 ARSHQ5FYA8 562 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 HYIQ5T013 277 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 ALS2CLQ60I27 953 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 GPBP1Q86WP2 473 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 IQCKQ8N0W5 287 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 BCAS4Q8TDM0 211 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 CEP63Q96MT8 703 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 GOLPH3Q9H4A6 298 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
PHGDH-233ENST00000642021 EIF3HO15372 352 aaKnown RBP eCLIP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 OPA1O60313 960 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 TTLL1O95922 423 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 GUCY2FP51841 1108 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 GLE1Q53GS7 698 aaKnown RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 TBC1D16Q8TBP0 767 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 PIK3R5Q8WYR1 880 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 CUL5Q93034 780 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 GANQ9H2C0 597 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 HSF2BPO75031 334 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 MED24O75448 989 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 MARSP56192 900 aaKnown RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 SEPT2Q15019 361 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 DPY19L2P1Q6NXN4 242 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 CASKIN2Q8WXE0 1202 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 CCDC43Q96MW1 224 aaKnown RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 NUCKS1Q9H1E3 243 aaKnown RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 AIPL1Q9NZN9 384 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
PHGDH-233ENST00000642021 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-233ENST00000642021 SLC9A1P19634 815 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
PHGDH-233ENST00000642021 PTPROQ16827 1216 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 BCAS3Q9H6U6 928 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 ZBTB5O15062 677 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 NOP2P46087 812 aaKnown RBP15.2■□□□□ 0.02
PHGDH-233ENST00000642021 ATP1A2P50993 1020 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 PSMC6P62333 389 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 PTK2Q05397 1052 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 PDCLQ13371 301 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 CCDC65Q8IXS2 484 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 MXD3Q9BW11 206 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 RNF14Q9UBS8 474 aa15.2■□□□□ 0.02
PHGDH-233ENST00000642021 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SHMT1P34896 483 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 NNTQ13423 1086 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 IRF2BP2Q7Z5L9 587 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 PROCA1Q8NCQ7 364 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-233ENST00000642021 RUFY1Q96T51 708 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 NT5C3AQ9H0P0 336 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 C6orf229H3BNL8 230 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 RAD51CO43502 376 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-233ENST00000642021 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 ZNF571Q7Z3V5 609 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SLF2Q8IX21 1173 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SERPINB13Q9UIV8 391 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SAMM50Q9Y512 469 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 RIMBP2O15034 1052 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 GNA14O95837 355 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 HOXD13P35453 343 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SLC12A3P55017 1021 aa15.19■□□□□ 0.02
PHGDH-233ENST00000642021 SKOR1P84550 965 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms