RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
PHGDH-231ENST00000641939 AGO4Q9HCK5 861 aaKnown RBP17.12■□□□□ 0.33
PHGDH-231ENST00000641939 SLC9A2Q9UBY0 812 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 STK36Q9NRP7 1315 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 HOXC8P31273 242 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 RBL2Q08999 1139 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 ITGB3BPQ13352 177 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-231ENST00000641939 HIC1Q14526 733 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 DEFB128Q7Z7B8 93 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 DEFB123Q8N688 67 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 AIFM3Q96NN9 605 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
PHGDH-231ENST00000641939 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
PHGDH-231ENST00000641939 GBF1Q92538 1859 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-231ENST00000641939 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-231ENST00000641939 GNAT1P11488 350 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 CKBP12277 381 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 SELPP16109 830 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 SETQ01105 290 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-231ENST00000641939 ME3Q16798 604 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-231ENST00000641939 GALNT17Q6IS24 598 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
PHGDH-231ENST00000641939 LARGE1O95461 756 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 CIITAP33076 1130 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 ACTR2P61160 394 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 Q7L0L9 218 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 GLG1Q92896 1179 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 GTF3C6Q969F1 213 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-231ENST00000641939 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
PHGDH-231ENST00000641939 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 IPO5O00410 1097 aaKnown RBP17.08■□□□□ 0.32
PHGDH-231ENST00000641939 TREHO43280 583 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 LGR5O75473 907 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 PARNO95453 639 aaKnown RBP17.08■□□□□ 0.32
PHGDH-231ENST00000641939 XBP1P17861 261 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 USP11P51784 963 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.32
PHGDH-231ENST00000641939 PRR16Q569H4 304 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 WNT8BQ93098 351 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 ZNF577Q9BSK1 485 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHGDH-231ENST00000641939 AZI2Q9H6S1 392 aa17.08■□□□□ 0.32
PHGDH-231ENST00000641939 M0R2N6 131 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
PHGDH-231ENST00000641939 DHX15O43143 795 aaKnown RBP17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ATG7O95352 703 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ACTN1P12814 892 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 MARK3P27448 753 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 NPY5RQ15761 445 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ZNF618Q5T7W0 954 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 TBCKQ8TEA7 893 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 WASF1Q92558 559 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 PCYT2Q99447 389 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-231ENST00000641939 KCNJ14Q9UNX9 436 aa17.07■□□□□ 0.32
PHGDH-231ENST00000641939 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 EDIL3O43854 480 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 DTNBO60941 627 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 CCNE2O96020 404 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 THPOP40225 353 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 ADAM17P78536 824 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 PPFIA1Q13136 1202 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 LENG9Q96B70 501 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 MTMR10Q9NXD2 777 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
PHGDH-231ENST00000641939 CXCL10P02778 98 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 FDPSP14324 419 aaKnown RBP17.05■□□□□ 0.32
PHGDH-231ENST00000641939 DNAJB2P25686 324 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 STAT5BP51692 787 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 GPNMBQ14956 572 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 NONOQ15233 471 aaKnown RBP eCLIP17.05■□□□□ 0.32
PHGDH-231ENST00000641939 TRAF7Q6Q0C0 670 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 ABHD15Q6UXT9 468 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
PHGDH-231ENST00000641939 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms