RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 NAPAP54920 295 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 FUT2Q10981 343 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 KRT32Q14532 448 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 TJAP1Q5JTD0 557 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 CDHR1Q96JP9 859 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 PGBD1Q96JS3 809 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 OSBPL7Q9BZF2 842 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 THEGQ9P2T0 379 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 V9GY48 417 aaPredicted RBP15.96■□□□□ 0.14
LINC00339-211ENST00000641009 BRWD1Q9NSI6 2320 aa15.96■□□□□ 0.14
LINC00339-211ENST00000641009 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
LINC00339-211ENST00000641009 EMSYQ7Z589 1322 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 GOLGA8AA7E2F4 631 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 GOLGA8BA8MQT2 603 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 GJB5O95377 273 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 GNAT1P11488 350 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 CDC27P30260 824 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 ARHGAP4P98171 946 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 KRT40Q6A162 431 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 FAM117BQ6P1L5 589 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC00339-211ENST00000641009 LMBR1Q8WVP7 490 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 FAM217BQ9NTX9 383 aaPredicted RBP15.95■□□□□ 0.14
LINC00339-211ENST00000641009 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
LINC00339-211ENST00000641009 MTCH2Q9Y6C9 303 aa15.95■□□□□ 0.14
LINC00339-211ENST00000641009 EVPLQ92817 2033 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 STXBP3O00186 592 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 EFCAB14O75071 495 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 ADAM17P78536 824 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 PLEKHG4Q58EX7 1191 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 SEPT1Q8WYJ6 367 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
LINC00339-211ENST00000641009 EHMT1Q9H9B1 1298 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 RIC8AQ9NPQ8 531 aa15.94■□□□□ 0.14
LINC00339-211ENST00000641009 GTPBP6O43824 516 aaPredicted RBP15.93■□□□□ 0.14
LINC00339-211ENST00000641009 HMGB1P09429 215 aaKnown RBP15.93■□□□□ 0.14
LINC00339-211ENST00000641009 MARK3P27448 753 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 ADCY7P51828 1080 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 FGD1P98174 961 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
LINC00339-211ENST00000641009 PPP1R18Q6NYC8 613 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 CYP2W1Q8TAV3 490 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 ATXN2LQ8WWM7 1075 aaKnown RBP15.93■□□□□ 0.14
LINC00339-211ENST00000641009 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
LINC00339-211ENST00000641009 RAD9AQ99638 391 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
LINC00339-211ENST00000641009 RALGAPA2Q2PPJ7 1873 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 SMCO2A6NFE2 343 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 CAND2O75155 1236 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 POU3F3P20264 500 aaPredicted RBP15.92■□□□□ 0.14
LINC00339-211ENST00000641009 ADD1P35611 737 aaKnown RBP15.92■□□□□ 0.14
LINC00339-211ENST00000641009 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 GRB10Q13322 594 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 RUFY4Q6ZNE9 571 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 Q6ZUG5 572 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 KCNB2Q92953 911 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 MXRA8Q9BRK3 442 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 KCNH7Q9NS40 1196 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 TMEM260Q9NX78 707 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 BARHL2Q9NY43 387 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
LINC00339-211ENST00000641009 MAFGO15525 162 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 HSPA4P34932 840 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 METAP2P50579 478 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 PPFIA1Q13136 1202 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 GDPD5Q8WTR4 605 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 GLG1Q92896 1179 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 BRF1Q92994 677 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ASB2Q96Q27 587 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ANO3Q9BYT9 981 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 JPH1Q9HDC5 661 aaPredicted RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ERAP1Q9NZ08 941 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ATG2AQ2TAZ0 1938 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 LINC01553A4QN01 128 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 hCG_1984214I3L0E3 225 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 LPXNO60711 386 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 AMHP03971 560 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ARP10275 920 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 RCAN1P53805 252 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 MRPS5P82675 430 aaKnown RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 SKIV2LQ15477 1246 aaKnown RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 GRIK4Q16099 956 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 ZNF713Q8N859 430 aaPredicted RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 SEPT8Q92599 483 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 PCYT2Q99447 389 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
LINC00339-211ENST00000641009 SMARCAD1Q9H4L7 1026 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
LINC00339-211ENST00000641009 CHRNA1P02708 482 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 CLK2P49760 499 aaKnown RBP15.9■□□□□ 0.14
LINC00339-211ENST00000641009 TFF2Q03403 129 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms