RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ADCY8P40145 1251 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 RNF14Q9UBS8 474 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 HPS5Q9UPZ3 1129 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 KIF20BQ96Q89 1820 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 INO80B-WBP1J3KQ70 363 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 M0QZ92 97 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 RASA3Q14644 834 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 TAF12Q16514 161 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 ZSCAN26Q16670 478 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 SFR1Q86XK3 245 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 CEP57Q86XR8 500 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 INO80BQ9C086 356 aaPredicted RBP19.13■□□□□ 0.65
SCARB2-223ENST00000640640 MTMR4Q9NYA4 1195 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 PIM2Q9P1W9 311 aa19.13■□□□□ 0.65
SCARB2-223ENST00000640640 HEXIM1O94992 359 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 CCND2P30279 289 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 ARL1P40616 181 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 MTERF2Q49AM1 385 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 FAM71BQ8TC56 605 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 RASSF4Q9H2L5 321 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 UBE2TQ9NPD8 197 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 MKRN1Q9UHC7 482 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 FLT1P17948 1338 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 STK10O94804 968 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 HADHQ16836 314 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 MIS18BP1Q6P0N0 1132 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 MAGOHBQ96A72 148 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 ZNF653Q96CK0 615 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 SPATA31A5Q5VU36 1347 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 SPATA31A7Q8IWB4 1347 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 INPP5BP32019 993 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 RNF207Q6ZRF8 634 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 USP49Q70CQ1 688 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 TTC31Q49AM3 519 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 GUF1Q8N442 669 aaKnown RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 JPH2Q9BR39 696 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-223ENST00000640640 MXD3Q9BW11 206 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 VPS37BQ9H9H4 285 aa19.12■□□□□ 0.65
SCARB2-223ENST00000640640 PGRMC1O00264 195 aaKnown RBP19.11■□□□□ 0.65
SCARB2-223ENST00000640640 ATP1A2P50993 1020 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 GPR162Q16538 588 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 GRK7Q8WTQ7 553 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 CCSER1Q9C0I3 900 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 EPB41L5Q9HCM4 733 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 PPANQ9NQ55 473 aaKnown RBP19.11■□□□□ 0.65
SCARB2-223ENST00000640640 SSX2IPQ9Y2D8 614 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 PXDNQ92626 1479 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 PABPN1LA6NDY0 278 aaKnown RBP19.11■□□□□ 0.65
SCARB2-223ENST00000640640 CLCN6P51797 869 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 COASYQ13057 564 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 PDXDC2PQ6P474 469 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 POLD4Q9HCU8 107 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
SCARB2-223ENST00000640640 GOLGA8KD6RF30 607 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 GNGT1P63211 74 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 C10orf76Q5T2E6 689 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 INTS5Q6P9B9 1019 aaKnown RBP19.11■□□□□ 0.65
SCARB2-223ENST00000640640 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 PCDHB4Q9Y5E5 795 aa19.11■□□□□ 0.65
SCARB2-223ENST00000640640 ALCAMQ13740 583 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 EEPD1Q7L9B9 569 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 RMDN3Q96TC7 470 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 HESX1Q9UBX0 185 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 USP27XA6NNY8 438 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 NDC80O14777 642 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 PPFIA4O75335 1185 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 PEX3P56589 373 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 TFDP1Q14186 410 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 FBXO38Q6PIJ6 1188 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 CEP63Q96MT8 703 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 TTC26A0AVF1 554 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 POTEFA5A3E0 1075 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 RNF8O76064 485 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 POTEIP0CG38 1075 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 SEMA3FQ13275 785 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 POTEGQ6S5H5 508 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 POTEEQ6S8J3 1075 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 HACE1Q8IYU2 909 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 RSAD2Q8WXG1 361 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 DPF2Q92785 391 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 HGSO14964 777 aaPredicted RBP19.1■□□□□ 0.65
SCARB2-223ENST00000640640 HHATQ5VTY9 493 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 SCYL2Q6P3W7 929 aa19.1■□□□□ 0.65
SCARB2-223ENST00000640640 UHMK1Q8TAS1 419 aaKnown RBP19.1■□□□□ 0.65
SCARB2-223ENST00000640640 CALRP27797 417 aaKnown RBP19.09■□□□□ 0.65
SCARB2-223ENST00000640640 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 TUBE1Q9UJT0 475 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 ZNF148Q9UQR1 794 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 STAM2O75886 525 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 PSAPP07602 524 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 EPHB4P54760 987 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 CCNA1P78396 465 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 C2orf54Q08AI8 447 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 USP11P51784 963 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 SF3A3Q12874 501 aaKnown RBP eCLIP19.09■□□□□ 0.65
SCARB2-223ENST00000640640 MTMR1Q13613 665 aa19.09■□□□□ 0.65
SCARB2-223ENST00000640640 HERC5Q9UII4 1024 aaKnown RBP19.09■□□□□ 0.65
SCARB2-223ENST00000640640 ADGRG1Q9Y653 693 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms