RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 VWA5AO00534 786 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 PHACTR2O75167 634 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 GNAT1P11488 350 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 SLC16A2P36021 539 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 CUL4AQ13619 759 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 RSPH3Q86UC2 560 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 SLAIN1Q8ND83 568 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 ABHD16BQ9H3Z7 469 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 ZSWIM4Q9H7M6 989 aa6.25□□□□□ -1.41
RTTN-218ENST00000640408 ZNF215Q9UL58 517 aaPredicted RBP6.25□□□□□ -1.41
RTTN-218ENST00000640408 TPX2Q9ULW0 747 aaKnown RBP6.25□□□□□ -1.41
RTTN-218ENST00000640408 DNAJC8O75937 253 aaPredicted RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 RXRAP19793 462 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 CNGA1P29973 690 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 PRELPP51888 382 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 STOX1Q6ZVD7 989 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 RAB11FIP4Q86YS3 637 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 ZNF710Q8N1W2 664 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 VTA1Q9NP79 307 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 FAM114A2Q9NRY5 505 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 NRBP2Q9NSY0 501 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 SLC26A4O43511 780 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 ABCD1P33897 745 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 DNM2P50570 870 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 KRT76Q01546 638 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 SPECC1Q5M775 1068 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 OTUD6AQ7L8S5 288 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 CTU1Q7Z7A3 348 aaKnown RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 PLA2G4DQ86XP0 818 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 RNF10Q8N5U6 811 aaKnown RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 CCDC155Q8N6L0 562 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 BRI3BPQ8WY22 251 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TSC22D3Q99576 134 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 NT5C3AQ9H0P0 336 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.24□□□□□ -1.41
RTTN-218ENST00000640408 PHLPP2Q6ZVD8 1323 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 POTECB2RU33 542 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 GAS7O60861 476 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 SNHG28P0DPA3 235 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 PPFIA1Q13136 1202 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 MOXD1Q6UVY6 613 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 ANO3Q9BYT9 981 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 EMILIN3Q9NT22 766 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 FRMD3A2A2Y4 597 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 H0YCG3 227 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 PPFIA4O75335 1185 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 CPA1P15085 419 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
RTTN-218ENST00000640408 ME3Q16798 604 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TADA2BQ86TJ2 420 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 RDM1Q8NG50 284 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TSC1Q92574 1164 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 APBA2Q99767 749 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TEKT3Q9BXF9 490 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 RIC8AQ9NPQ8 531 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 POLR3EQ9NVU0 708 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 CPA4Q9UI42 421 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TPCN1Q9ULQ1 816 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TRIM17Q9Y577 477 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 USH1CQ9Y6N9 552 aa6.24□□□□□ -1.41
RTTN-218ENST00000640408 TBX3O15119 743 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 POTEIP0CG38 1075 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 POTEJP0CG39 1038 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 SFNP31947 248 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 ANTXR2P58335 489 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 MAP2K5Q13163 448 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 SETDB1Q15047 1291 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 FAM43BQ6ZT52 329 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 MOB2Q70IA6 237 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 KATNAL1Q9BW62 490 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 JMJD4Q9H9V9 463 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 SCAF8Q9UPN6 1271 aaKnown RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 TESPA1A2RU30 521 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 SPDYE16A6NNV3 312 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 GOLGA8KD6RF30 607 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 CHUKO15111 745 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 CETN3O15182 167 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 TLR3O15455 904 aaKnown RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 TMOD1P28289 359 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 BAATQ14032 418 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 LETM2Q2VYF4 491 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 TTC38Q5R3I4 469 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 ARMCX6Q7L4S7 300 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 STMN2Q93045 179 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 PHKBQ93100 1093 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 DNAI2Q9GZS0 605 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 MTIF3Q9H2K0 278 aaKnown RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 HMX1Q9NP08 348 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 MORC2Q9Y6X9 1032 aaPredicted RBP6.23□□□□□ -1.41
RTTN-218ENST00000640408 M0QZ92 97 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 CDC42EP1Q00587 391 aa6.23□□□□□ -1.41
RTTN-218ENST00000640408 HLTFQ14527 1009 aaKnown RBP eCLIP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms