RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 KRT25Q7Z3Z0 450 aa24.75■■□□□ 1.55
SCN1B-206ENST00000638536 SEPT1Q8WYJ6 367 aa24.75■■□□□ 1.55
SCN1B-206ENST00000638536 PCYT2Q99447 389 aa24.75■■□□□ 1.55
SCN1B-206ENST00000638536 TUT1Q9H6E5 874 aaKnown RBP24.75■■□□□ 1.55
SCN1B-206ENST00000638536 IPO5O00410 1097 aaKnown RBP24.74■■□□□ 1.55
SCN1B-206ENST00000638536 RAG1P15918 1043 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 KRT2P35908 639 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 SDF4Q9BRK5 362 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 ZNF577Q9BSK1 485 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 SEZ6LQ9BYH1 1024 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 GTF2IRD1Q9UHL9 959 aa24.74■■□□□ 1.55
SCN1B-206ENST00000638536 MSH4O15457 936 aa24.73■■□□□ 1.55
SCN1B-206ENST00000638536 CYP2C18P33260 490 aa24.73■■□□□ 1.55
SCN1B-206ENST00000638536 ACTR2P61160 394 aa24.73■■□□□ 1.55
SCN1B-206ENST00000638536 SESTD1Q86VW0 696 aa24.73■■□□□ 1.55
SCN1B-206ENST00000638536 SCN5AQ14524 2016 aa24.73■■□□□ 1.55
SCN1B-206ENST00000638536 CCDC194A0A1B0GVG4 234 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 TIMP1P01033 207 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 SETQ01105 290 aaPredicted RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 DIS3L2Q8IYB7 885 aaKnown RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 C7orf31Q8N865 590 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 LBHD1Q9BQE6 289 aaPredicted RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 NOC4LQ9BVI4 516 aaKnown RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 KATNAL1Q9BW62 490 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 RNPEPQ9H4A4 650 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 MYH9P35579 1960 aaKnown RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 CYP3A7-CYP3A51PA0A087WV96 503 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 CYP3A7P24462 503 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 EPHB4P54760 987 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 PTPN11Q06124 597 aaPredicted RBP24.72■■□□□ 1.55
SCN1B-206ENST00000638536 PTGISQ16647 500 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 LETM2Q2VYF4 491 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 MBOAT7Q96N66 472 aa24.72■■□□□ 1.55
SCN1B-206ENST00000638536 SLC37A4O43826 429 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 BMP8BP34820 402 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 HMGN5P82970 282 aaKnown RBP24.71■■□□□ 1.55
SCN1B-206ENST00000638536 Q4G0T1 1027 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 C8orf76Q96K31 380 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 UBE2OQ9C0C9 1292 aaKnown RBP24.71■■□□□ 1.55
SCN1B-206ENST00000638536 HIPK3Q9H422 1215 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 TET1Q8NFU7 2136 aa24.71■■□□□ 1.55
SCN1B-206ENST00000638536 WNT7AO00755 349 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 ATG7O95352 703 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 SMIM10L2AP0DMW4 78 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 SMIM10L2BP0DMW5 78 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 MARK3P27448 753 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 TRIM29Q14134 588 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 WNT8BQ93098 351 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 WNT8AQ9H1J5 351 aa24.7■■□□□ 1.54
SCN1B-206ENST00000638536 LGR5O75473 907 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 MCM2P49736 904 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 CCL23P55773 120 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 NEK8Q86SG6 692 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 FAM184AQ8NB25 1140 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 IL27Q8NEV9 243 aa24.69■■□□□ 1.54
SCN1B-206ENST00000638536 DHX38Q92620 1227 aaKnown RBP24.69■■□□□ 1.54
SCN1B-206ENST00000638536 SUPT20HL2P0C7V6 817 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 HABP4Q5JVS0 413 aaKnown RBP24.68■■□□□ 1.54
SCN1B-206ENST00000638536 MFSD5Q6N075 450 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 ABHD15Q6UXT9 468 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 FBXO18Q8NFZ0 1043 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 SLC5A5Q92911 643 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 BRMS1Q9HCU9 246 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 SETD4Q9NVD3 440 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 DDX25Q9UHL0 483 aaKnown RBP24.68■■□□□ 1.54
SCN1B-206ENST00000638536 CSF2RAP15509 400 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 HOXC8P31273 242 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 MOXD1Q6UVY6 613 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 ETNPPLQ8TBG4 499 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 GLG1Q92896 1179 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 SCLYQ96I15 445 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 TBC1D22BQ9NU19 505 aa24.68■■□□□ 1.54
SCN1B-206ENST00000638536 IGKV6D-21A0A0A0MT36 114 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 CCNT1O60563 726 aaKnown RBP24.67■■□□□ 1.54
SCN1B-206ENST00000638536 C9orf50Q5SZB4 431 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 C16orf59Q7L2K0 433 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 CCDC60Q8IWA6 550 aaPredicted RBP24.67■■□□□ 1.54
SCN1B-206ENST00000638536 VWCEQ96DN2 955 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 ZNF215Q9UL58 517 aaPredicted RBP24.67■■□□□ 1.54
SCN1B-206ENST00000638536 NOD1Q9Y239 953 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 EMSYQ7Z589 1322 aa24.67■■□□□ 1.54
SCN1B-206ENST00000638536 TREHO43280 583 aa24.66■■□□□ 1.54
SCN1B-206ENST00000638536 SMARCAD1Q9H4L7 1026 aa24.66■■□□□ 1.54
SCN1B-206ENST00000638536 KIF28PB7ZC32 967 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 PSMD10O75832 226 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 GJB2P29033 226 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 FPGSQ05932 587 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 PPP4R3AQ6IN85 833 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 UNC45AQ9H3U1 944 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 ERAP1Q9NZ08 941 aa24.65■■□□□ 1.54
SCN1B-206ENST00000638536 C17orf102A2RUQ5 167 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 STAT5BP51692 787 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 ADAM17P78536 824 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 SHHQ15465 462 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 LRCH2Q5VUJ6 765 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 SWSAP1Q6NVH7 229 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 POTEDQ86YR6 584 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 LMBR1Q8WVP7 490 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 HAS1Q92839 578 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 ZBTB10Q96DT7 871 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms