RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LRRC34Q8IZ02 419 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 FAM136AQ96C01 138 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 FBXL5Q9UKA1 691 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 MAP3K13O43283 966 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 NCK2O43639 380 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 CHN1P15882 459 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 PEX5P50542 639 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 RTN1Q16799 776 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 FGD4Q96M96 766 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
CAPN3-221ENST00000638141 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-221ENST00000638141 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
CAPN3-221ENST00000638141 A0A1B0GVG6 124 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 SSU72P8A0A1W2PR75 194 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 PSMA7O14818 248 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 NUDT17P0C025 328 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 PRCPP42785 496 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 MAGEA1P43355 309 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 NLRP5P59047 1200 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 FOXO4P98177 505 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 USP4Q13107 963 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 DBN1Q16643 649 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 TMEM154Q6P9G4 183 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 GJB6O95452 261 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 MYLK4Q86YV6 388 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 LPIN2Q92539 896 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 PSMB7Q99436 277 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 ELAC2Q9BQ52 826 aaKnown RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 RNF26Q9BY78 433 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 TRIM7Q9C029 511 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 ADAM7Q9H2U9 754 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
CAPN3-221ENST00000638141 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 PNPLA7Q6ZV29 1317 aa13.1□□□□□ -0.31
CAPN3-221ENST00000638141 A0A087WZG4 1122 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 BICDL2A1A5D9 508 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 SUN1O94901 812 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 KRT2P35908 639 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 TIMM10P62072 90 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 TRADDQ15628 312 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-221ENST00000638141 NGLY1Q96IV0 654 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 RPS6KC1Q96S38 1066 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 CIDEBQ9UHD4 219 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 ABCB11O95342 1321 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 A8MUI8 341 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 CCDC188H7C350 402 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 MAFGO15525 162 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 TPBGLP0DKB5 382 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 STAT6P42226 847 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
CAPN3-221ENST00000638141 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
CAPN3-221ENST00000638141 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms