RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 BFSP2Q13515 415 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 CCDC142Q17RM4 750 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 PBXIP1Q96AQ6 731 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 PLEKHG3A1L390 1219 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 LRRIQ3A6PVS8 624 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 SOX6P35712 828 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 TNFAIP1Q13829 316 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 KDRP35968 1356 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 STXBP3O00186 592 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 PLS3P13797 630 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 ABCE1P61221 599 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 EHHADHQ08426 723 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 ARL2BPQ9Y2Y0 163 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 POTEFA5A3E0 1075 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 VCAM1P19320 739 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 EPS8L2Q9H6S3 715 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 PCDHGB4Q9UN71 923 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 PCP11498 1178 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 CYLC2Q14093 348 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 INPP5AQ14642 412 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 TRIM54Q9BYV2 358 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 MYL7Q01449 175 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 FAM160B1Q5W0V3 765 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 GRAMD1AQ96CP6 724 aa20.73■□□□□ 0.91
CACNA1A-257ENST00000638009 CCDC22O60826 627 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 FAM102BQ5T8I3 360 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 C20orf194Q5TEA3 1177 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 CATSPER3Q86XQ3 398 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 PARP3Q9Y6F1 533 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 CSTF3Q12996 717 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 DARS2Q6PI48 645 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 TEX2Q8IWB9 1127 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 CFAP36Q96G28 342 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 MAEAQ7L5Y9 396 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 TBC1D22AQ8WUA7 517 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 CHURC1Q8WUH1 139 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 BRD8Q9H0E9 1235 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 FLCNQ8NFG4 579 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 LINS1Q8NG48 757 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 RMDN1Q96DB5 314 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 RUBCNLQ9H714 662 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 ATP8A2Q9NTI2 1148 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 ZFP69BQ9UJL9 534 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 PDHA1P08559 390 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 CDC26Q8NHZ8 85 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 AASDHQ4L235 1098 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 AHI1Q8N157 1196 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 SNX25Q9H3E2 840 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 SSH2Q76I76 1423 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 OLFM1Q99784 485 aa20.72■□□□□ 0.91
CACNA1A-257ENST00000638009 FSD1LQ9BXM9 530 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 TBC1D9BQ66K14 1250 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 EPM2AIP1Q7L775 607 aaPredicted RBP20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 RFWD2Q8NHY2 731 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 EPB41L5Q9HCM4 733 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 CYP26B1Q9NR63 512 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 FAM32AQ9Y421 112 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 FOXP2O15409 715 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 KRT14P02533 472 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 SURF1Q15526 300 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 RUBCNQ92622 972 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 ZNF274Q96GC6 653 aaPredicted RBP20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 FANCEQ9HB96 536 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 RPRD1BQ9NQG5 326 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 ZFYVE9O95405 1425 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 TMPRSS15P98073 1019 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 LONRF3Q496Y0 759 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 AGBL1Q96MI9 1066 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 OSBPL10Q9BXB5 764 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 TRAF3IP3Q9Y228 551 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 CDC27P30260 824 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 LRRC49Q8IUZ0 686 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 AK8Q96MA6 479 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 HPCAL4Q9UM19 191 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 BUB1O43683 1085 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 DLATP10515 647 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 CCNYQ8ND76 341 aa20.71■□□□□ 0.91
CACNA1A-257ENST00000638009 RTL3Q8N8U3 475 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 SMCR8Q8TEV9 937 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 PRPSAP2O60256 369 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 GOLPH3LQ9H4A5 285 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 WDR17Q8IZU2 1322 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 GAP43P17677 238 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 EPHB1P54762 984 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 TBC1D19Q8N5T2 526 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 APPBP2Q92624 585 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 TEX28O15482 410 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 RALBP11234 206 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 CHMLP26374 656 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 CYP4F22Q6NT55 531 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 FGD2Q7Z6J4 655 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 ACRBPQ8NEB7 543 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 NT5C1BQ96P26 610 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 SMYD3Q9H7B4 428 aa20.7■□□□□ 0.9
CACNA1A-257ENST00000638009 SNAP25P60880 206 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms