RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
CACNA1A-239ENST00000637297 WDR81Q562E7 1941 aa10.4□□□□□ -0.74
CACNA1A-239ENST00000637297 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 FAM205CA6NFA0 338 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 DCDC2CA8MYV0 355 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 ARVCFO00192 962 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 MSH4O15457 936 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 PQBP1O60828 265 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 GAS7O60861 476 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 DEKP35659 375 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 TCF7P36402 384 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 RTP1P59025 263 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 PSMC6P62333 389 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 LRRC26Q2I0M4 334 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 LRCH2Q5VUJ6 765 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 C7orf61Q8IZ16 206 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 TNFRSF25Q93038 417 aa10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 TRIP12Q14669 1992 aaPredicted RBP10.39□□□□□ -0.75
CACNA1A-239ENST00000637297 SCN10AQ9Y5Y9 1956 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 H3BRB1 525 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 BACH1O14867 736 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 LGALS2P05162 132 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 U2AF2P26368 475 aaKnown RBP eCLIP10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 MCM7P33993 719 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 TRAPPC10P48553 1259 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 PSEN2P49810 448 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 ACTR2P61160 394 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 KRT76Q01546 638 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 ITGB3BPQ13352 177 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 MFSD10Q14728 455 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 ZNF174Q15697 407 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 CALCRLQ16602 461 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 CSPP1Q1MSJ5 1256 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 KIAA0753Q2KHM9 967 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 KLHL40Q2TBA0 621 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 TRIM60Q495X7 471 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 FAM160B1Q5W0V3 765 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 ZNF746Q6NUN9 644 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 MIS18BP1Q6P0N0 1132 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 SLFN12Q8IYM2 578 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 C7orf31Q8N865 590 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 RIT2Q99578 217 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
CACNA1A-239ENST00000637297 KIF28PB7ZC32 967 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 TBX3O15119 743 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 DHX15O43143 795 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 CHMP2AO43633 222 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 SLC37A4O43826 429 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 EDIL3O43854 480 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 NEMFO60524 1076 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 MBD3O95983 291 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 PSAPP07602 524 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 SFNP31947 248 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 STAT5BP51692 787 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 JAK3P52333 1124 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 TLE2Q04725 743 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 PTPN11Q06124 597 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 SNX17Q15036 470 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 RILPL1Q5EBL4 403 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 TTC38Q5R3I4 469 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 MIER3Q7Z3K6 550 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 CKAP2LQ8IYA6 745 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 SMAP1Q8IYB5 467 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 SLC5A5Q92911 643 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 GJA10Q969M2 543 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 LENG9Q96B70 501 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 MBOAT7Q96N66 472 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 TOX2Q96NM4 488 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 C16orf70Q9BSU1 422 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 PRDM5Q9NQX1 630 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 ERAP1Q9NZ08 941 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 PCDHA10Q9Y5I2 948 aa10.37□□□□□ -0.75
CACNA1A-239ENST00000637297 WDR64B1ANS9 1081 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 F2P00734 622 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 CLTBP09497 229 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 GNAT1P11488 350 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 HOXD8P13378 290 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 MARK3P27448 753 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 TXKP42681 527 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 CDK7P50613 346 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 ORC2Q13416 577 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 SWSAP1Q6NVH7 229 aa10.36□□□□□ -0.75
CACNA1A-239ENST00000637297 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms