RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-225	ENST00000637189	GSDMA	Q96QA5	445 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	HNRNPDL	O14979	420 aa	Known RBP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	IQCB1	Q15051	598 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CFAP65	Q6ZU64	1925 aa	Known RBP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PRKAB2	O43741	272 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	FTCD	O95954	541 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MRPS25	P82663	173 aa	Known RBP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SLC7A5	Q01650	507 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MAN1B1	Q9UKM7	699 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CRKL	P46109	303 aa	Known RBP	13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CFAP36	Q96G28	342 aa		13.61	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CLRN2	A0PK11	232 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CLIC2	O15247	247 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	LPXN	O60711	386 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	KIF11	P52732	1056 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PTK2	Q05397	1052 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ARL10	Q8N8L6	244 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CCNY	Q8ND76	341 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	P2RX5	Q93086	422 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ZNF577	Q9BSK1	485 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SOS2	Q07890	1332 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MOCS3	O95396	460 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	LMNB1	P20700	586 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	POLR2B	P30876	1174 aa	Known RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	FBXO38	Q6PIJ6	1188 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PCIF1	Q9H4Z3	704 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MEIS1	O00470	390 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	LRRN2	O75325	713 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CIAO1	O76071	339 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PDZD4	Q76G19	769 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	RYBP	Q8N488	228 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	KIF2C	Q99661	725 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SEC31B	Q9NQW1	1179 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	POLR3E	Q9NVU0	708 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PI16	Q6UXB8	463 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ENAH	Q8N8S7	591 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ACRBP	Q8NEB7	543 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	NRBP2	Q9NSY0	501 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SFMBT1	Q9UHJ3	866 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TRPC5	Q9UL62	973 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ASAP1	Q9ULH1	1129 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ABCC2	Q92887	1545 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CDC25A	P30304	524 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PRPSAP1	Q14558	356 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	BBOF1	Q8ND07	529 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MAML1	Q92585	1016 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	RABGGTA	Q92696	567 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	NT5C1B	Q96P26	610 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	AMN	Q9BXJ7	453 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	RNF26	Q9BY78	433 aa	Predicted RBP	13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MAGEF1	Q9HAY2	307 aa		13.6	□□□□□ -0.23
CHRNA7-225	ENST00000637189	GOLGA8S	H3BPF8	625 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CP	P00450	1065 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	AFP	P02771	609 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PSMD7	P51665	324 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	NR5A1	Q13285	461 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	HABP4	Q5JVS0	413 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PIGS	Q96S52	555 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	UTP6	Q9NYH9	597 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SOWAHD	A6NJG2	315 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	LAD1	O00515	517 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CHGB	P05060	677 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MCF2	P10911	925 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	DDIT3	P35638	169 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	BASP1	P80723	227 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PARP9	Q8IXQ6	854 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CCHCR1	Q8TD31	782 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TBCK	Q8TEA7	893 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	MYO1F	O00160	1098 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TRIM66	O15016	1216 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PSMC2	P35998	433 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	KIF23	Q02241	960 aa	Predicted RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	NNT	Q13423	1086 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	AOC3	Q16853	763 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	LCORL	Q8N3X6	602 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	FAM133A	Q8N9E0	248 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	DTNBP1	Q96EV8	351 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SLC5A4	Q9NY91	659 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	IPO11	Q9UI26	975 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	NOVA2	Q9UNW9	492 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ADGRL2	O95490	1459 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TRIM37	O94972	964 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	KCNA4	P22459	653 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	DHX9	Q08211	1270 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	SGO2	Q562F6	1265 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	DCAF15	Q66K64	600 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	DNAAF3	Q8N9W5	541 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TXLNG	Q9NUQ3	528 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PFDN6	O15212	129 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	ZBTB24	O43167	697 aa	Predicted RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	GDF11	O95390	407 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	PC	P11498	1178 aa	Known RBP	13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	CUL3	Q13618	768 aa		13.59	□□□□□ -0.23
CHRNA7-225	ENST00000637189	TRIM60	Q495X7	471 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms