RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CUL5Q93034 780 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 GANQ9H2C0 597 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 KCTD10Q9H3F6 313 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 NLRC4Q9NPP4 1024 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 A0A087WUV0 522 aaPredicted RBP16.01■□□□□ 0.15
CLN6-215ENST00000636674 PALMO75781 387 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CLN6-215ENST00000636674 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 PLEKHA4Q9H4M7 779 aa16.01■□□□□ 0.15
CLN6-215ENST00000636674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLN6-215ENST00000636674 MYH4Q9Y623 1939 aa16■□□□□ 0.15
CLN6-215ENST00000636674 ZEB2O60315 1214 aa16■□□□□ 0.15
CLN6-215ENST00000636674 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
CLN6-215ENST00000636674 GLI1P08151 1106 aa16■□□□□ 0.15
CLN6-215ENST00000636674 MYBP10242 640 aa16■□□□□ 0.15
CLN6-215ENST00000636674 KLRC1P26715 233 aa16■□□□□ 0.15
CLN6-215ENST00000636674 NOP2P46087 812 aaKnown RBP16■□□□□ 0.15
CLN6-215ENST00000636674 POLR2FP61218 127 aaKnown RBP16■□□□□ 0.15
CLN6-215ENST00000636674 GNGT1P63211 74 aa16■□□□□ 0.15
CLN6-215ENST00000636674 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
CLN6-215ENST00000636674 WHAMMQ8TF30 809 aa16■□□□□ 0.15
CLN6-215ENST00000636674 ARL8AQ96BM9 186 aa16■□□□□ 0.15
CLN6-215ENST00000636674 MS4A14Q96JA4 679 aa16■□□□□ 0.15
CLN6-215ENST00000636674 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
CLN6-215ENST00000636674 PITPNM2Q9BZ72 1349 aa16■□□□□ 0.15
CLN6-215ENST00000636674 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 EBAG9O00559 213 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 UFL1O94874 794 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 MRPL12P52815 198 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 TADA2BQ86TJ2 420 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 LRRC47Q8N1G4 583 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 TMEM59LQ9UK28 342 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 TTLL1O95922 423 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 CARSP49589 748 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 NAP1L1P55209 391 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 UBE2SQ16763 222 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
CLN6-215ENST00000636674 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 ADGRF4Q8IZF3 695 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 SCFD1Q8WVM8 642 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 HINFPQ9BQA5 517 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 GLT8D2Q9H1C3 349 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 PLCB1Q9NQ66 1216 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
CLN6-215ENST00000636674 A0A087X0T9 212 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 FAM228BP0C875 321 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 AKR1B1P15121 316 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 ANXA13P27216 316 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 CCT5P48643 541 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 ASIC2Q16515 512 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
CLN6-215ENST00000636674 CFAP58Q5T655 872 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 KDM7AQ6ZMT4 941 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 PACS2Q86VP3 889 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 BCAS4Q8TDM0 211 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 MBOAT7Q96N66 472 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 KCNMB3Q9NPA1 279 aa15.98■□□□□ 0.15
CLN6-215ENST00000636674 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 ZBTB5O15062 677 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 CYP11B2P19099 503 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 TNNC1P63316 161 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 KLHL30Q0D2K2 578 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 RAPGEF1Q13905 1077 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 KIAA0753Q2KHM9 967 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 DPY19L2P1Q6NXN4 242 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 EPB41L5Q9HCM4 733 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 DAGLAQ9Y4D2 1042 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 FTCDO95954 541 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 ERCC3P19447 782 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 GUCY2DQ02846 1103 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 MOXD1Q6UVY6 613 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 PIK3R5Q8WYR1 880 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 CCDC43Q96MW1 224 aaKnown RBP15.97■□□□□ 0.15
CLN6-215ENST00000636674 PAGR1Q9BTK6 254 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
CLN6-215ENST00000636674 BZW2Q9Y6E2 419 aaKnown RBP15.97■□□□□ 0.15
CLN6-215ENST00000636674 CYP3A7-CYP3A51PA0A087WV96 503 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 ZNF233A6NK53 670 aa15.96■□□□□ 0.15
CLN6-215ENST00000636674 SRRM3A6NNA2 597 aaPredicted RBP15.96■□□□□ 0.15
CLN6-215ENST00000636674 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
CLN6-215ENST00000636674 E9PMD0 336 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms