RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 Q9Y3F1 56 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 POTEMA6NI47 508 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 TBX3O15119 743 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 ZNF286BP0CG31 522 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
CTSD-207ENST00000636571 SOX10P56693 466 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 KCNA10Q16322 511 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 CCSAPQ6IQ19 270 aaPredicted RBP17.5■□□□□ 0.39
CTSD-207ENST00000636571 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 LEO1Q8WVC0 666 aaPredicted RBP17.5■□□□□ 0.39
CTSD-207ENST00000636571 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 RIT2Q99578 217 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 TBC1D22BQ9NU19 505 aa17.5■□□□□ 0.39
CTSD-207ENST00000636571 A6NJR5 290 aa17.49■□□□□ 0.39
CTSD-207ENST00000636571 NOP56O00567 594 aaKnown RBP17.49■□□□□ 0.39
CTSD-207ENST00000636571 TECP42680 631 aa17.49■□□□□ 0.39
CTSD-207ENST00000636571 STK38Q15208 465 aa17.49■□□□□ 0.39
CTSD-207ENST00000636571 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
CTSD-207ENST00000636571 GIMAP8Q8ND71 665 aaPredicted RBP17.49■□□□□ 0.39
CTSD-207ENST00000636571 PCYT2Q99447 389 aa17.49■□□□□ 0.39
CTSD-207ENST00000636571 CCDC85CA6NKD9 419 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 MYL3P08590 195 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 TCF7P36402 384 aaPredicted RBP17.48■□□□□ 0.39
CTSD-207ENST00000636571 NKX3-2P78367 333 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 ORC2Q13416 577 aaPredicted RBP17.48■□□□□ 0.39
CTSD-207ENST00000636571 NCAPH2Q6IBW4 605 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 CXCL17Q6UXB2 119 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 SLFN12Q8IYM2 578 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 SPC25Q9HBM1 224 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 ELP1O95163 1332 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
CTSD-207ENST00000636571 ASGR1P07306 291 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
CTSD-207ENST00000636571 CPT1AP50416 773 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 RNF180Q86T96 592 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
CTSD-207ENST00000636571 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
CTSD-207ENST00000636571 MYH9P35579 1960 aaKnown RBP17.47■□□□□ 0.39
CTSD-207ENST00000636571 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 PP2D1A8MPX8 630 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 CST5P28325 142 aaPredicted RBP17.47■□□□□ 0.39
CTSD-207ENST00000636571 CDC25AP30304 524 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 PURAQ00577 322 aaKnown RBP17.47■□□□□ 0.39
CTSD-207ENST00000636571 KRT76Q01546 638 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 UGCGQ16739 394 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 ATL3Q6DD88 541 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 ZNF746Q6NUN9 644 aaPredicted RBP17.47■□□□□ 0.39
CTSD-207ENST00000636571 ABHD15Q6UXT9 468 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 CCDC60Q8IWA6 550 aaPredicted RBP17.47■□□□□ 0.39
CTSD-207ENST00000636571 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 SEPT1Q8WYJ6 367 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 DISC1Q9NRI5 854 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 LMBRD1Q9NUN5 540 aa17.47■□□□□ 0.39
CTSD-207ENST00000636571 ATG7O95352 703 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 LGALS2P05162 132 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 CHMP4BP1P59074 171 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 PSMC6P62333 389 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 TRMT1LQ7Z2T5 733 aaKnown RBP17.46■□□□□ 0.39
CTSD-207ENST00000636571 MIER3Q7Z3K6 550 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 KAT2BQ92831 832 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 CLIC6Q96NY7 704 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 RCOR1Q9UKL0 485 aa17.46■□□□□ 0.39
CTSD-207ENST00000636571 DNM1LO00429 736 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SUPT20HL2P0C7V6 817 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 HOXD8P13378 290 aaPredicted RBP17.45■□□□□ 0.38
CTSD-207ENST00000636571 ACLYP53396 1101 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SLC39A14Q15043 492 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 DGKDQ16760 1214 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SPECC1Q5M775 1068 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SWSAP1Q6NVH7 229 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 RGL1Q9NZL6 768 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SCN10AQ9Y5Y9 1956 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 WDR64B1ANS9 1081 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 KBTBD13C9JR72 458 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 LAD1O00515 517 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 SPTLC2O15270 562 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 PPFIA4O75335 1185 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 MARK3P27448 753 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 PRPHP41219 470 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 ME1P48163 572 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 WRAP73Q9P2S5 460 aaPredicted RBP17.45■□□□□ 0.38
CTSD-207ENST00000636571 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 FBXO2Q9UK22 296 aaPredicted RBP17.45■□□□□ 0.38
CTSD-207ENST00000636571 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 PCDHA10Q9Y5I2 948 aa17.45■□□□□ 0.38
CTSD-207ENST00000636571 A0A1W2PQ45 241 aaPredicted RBP17.44■□□□□ 0.38
CTSD-207ENST00000636571 A0A1W2PQY0 241 aa17.44■□□□□ 0.38
CTSD-207ENST00000636571 BACH1O14867 736 aa17.44■□□□□ 0.38
CTSD-207ENST00000636571 YEATS4O95619 227 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms