RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
SRP54-AS1-205ENST00000636540 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 H3BRB1 525 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 EDIL3O43854 480 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CSF2RAP15509 400 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■□□□□ 10.5
SRP54-AS1-205ENST00000636540 HIC1Q14526 733 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SHHQ15465 462 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PTGISQ16647 500 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 GALNT17Q6IS24 598 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 BLIDQ8IZY5 108 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LENG9Q96B70 501 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
SRP54-AS1-205ENST00000636540 GSTTP1A0A1W2PQM5 241 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 JAK2O60674 1132 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SMIM10L2AP0DMW4 78 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SMIM10L2BP0DMW5 78 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ZNF76P36508 570 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CCL23P55773 120 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SEPT1Q8WYJ6 367 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 VWCEQ96DN2 955 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.392e-20■■□□□ 11.7
SRP54-AS1-205ENST00000636540 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 GJB4Q9NTQ9 266 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
SRP54-AS1-205ENST00000636540 MICAL3Q7RTP6 2002 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LGR5O75473 907 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SLC34A2O95436 690 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 XBP1P17861 261 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ACTR2P61160 394 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 BFSP2Q13515 415 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 RABEP1Q15276 862 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PRR16Q569H4 304 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 UTP14CQ5TAP6 766 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 WASF1Q92558 559 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 WNT8BQ93098 351 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SCLYQ96I15 445 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PCYT2Q99447 389 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
SRP54-AS1-205ENST00000636540 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 DHX15O43143 795 aaKnown RBP12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CCNE2O96020 404 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ACRP10323 421 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 USP11P51784 963 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PTK7Q13308 1070 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 RASIP1Q5U651 963 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 MOXD1Q6UVY6 613 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ZNF577Q9BSK1 485 aa12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SH2B1Q9NRF2 756 aaPredicted RBP12.61□□□□□ -0.39
SRP54-AS1-205ENST00000636540 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 DDX39AO00148 427 aaKnown RBP12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ATG7O95352 703 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TDP2O95551 362 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 PFKMP08237 780 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 IQCF3P0C7M6 154 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CKBP12277 381 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 MARK3P27448 753 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 RFC2P35250 354 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ADAM17P78536 824 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TRAF7Q6Q0C0 670 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 MBOAT7Q96N66 472 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 RNPEPQ9H4A4 650 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 SMARCAD1Q9H4L7 1026 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ERAP1Q9NZ08 941 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 ARID2Q68CP9 1835 aa12.6□□□□□ -0.39
SRP54-AS1-205ENST00000636540 LOXHD1Q8IVV2 1947 aa12.59□□□□□ -0.39
SRP54-AS1-205ENST00000636540 CYP3A7-CYP3A51PA0A087WV96 503 aa12.59□□□□□ -0.39
SRP54-AS1-205ENST00000636540 MSH4O15457 936 aa12.59□□□□□ -0.39
SRP54-AS1-205ENST00000636540 TREHO43280 583 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms