RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MSCO60682 206 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 LCP1P13796 627 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 KCNA6P17658 529 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 PAMP19021 973 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 POU3F2P20265 443 aaPredicted RBP3.76□□□□□ -1.81
PSPC1-208ENST00000635562 BDNFP23560 247 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 CALRP27797 417 aaKnown RBP3.76□□□□□ -1.81
PSPC1-208ENST00000635562 LTBRP36941 435 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 SEPHS1P49903 392 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 NCKAP1LP55160 1127 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 GJA9P57773 515 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 FOXO4P98177 505 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 MVKQ03426 396 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 KCNAB2Q13303 367 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 KIR3DS1Q14943 382 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 C21orf62-AS1Q17RA5 79 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 PLEKHG6Q3KR16 790 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 VWA3BQ502W6 1294 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 RNF187Q5TA31 235 aaPredicted RBP3.76□□□□□ -1.81
PSPC1-208ENST00000635562 BICRALQ6AI39 1079 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 IQCEQ6IPM2 695 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 KCNT2Q6UVM3 1135 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 HHIPL2Q6UWX4 724 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 USP53Q70EK8 1073 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 BRAPQ7Z569 592 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 C11orf96Q7Z7L8 435 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 RNF180Q86T96 592 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 AMOTL1Q8IY63 956 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 RCBTB1Q8NDN9 531 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 FNIP1Q8TF40 1166 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 SCYL1Q96KG9 808 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 SLKQ9H2G2 1235 aaPredicted RBP3.76□□□□□ -1.81
PSPC1-208ENST00000635562 SPC25Q9HBM1 224 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 NDOR1Q9UHB4 597 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 DBR1Q9UK59 544 aaKnown RBP3.76□□□□□ -1.81
PSPC1-208ENST00000635562 TRAF6Q9Y4K3 522 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 TCRBV16S1A1N1A0A5B0 115 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 ARVCFO00192 962 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 AQP7O14520 342 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 WNT9AO14904 365 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 DNAJC6O75061 913 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 POU3F3P20264 500 aaPredicted RBP3.75□□□□□ -1.81
PSPC1-208ENST00000635562 FBLN1P23142 703 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 STAT3P40763 770 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 MAGEA10P43363 369 aaPredicted RBP3.75□□□□□ -1.81
PSPC1-208ENST00000635562 LIMS1P48059 325 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 RHBDL3P58872 404 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 GPR85P60893 370 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 FAM193AP78312 1265 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 HTRA3P83110 453 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 SLC9A5Q14940 896 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 NT5DC1Q5TFE4 455 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 LBX2Q6XYB7 198 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 FILIP1Q7Z7B0 1213 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 FTSJ3Q8IY81 847 aaKnown RBP3.75□□□□□ -1.81
PSPC1-208ENST00000635562 CCDC146Q8IYE0 955 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 Q8N1Y9 231 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.75□□□□□ -1.81
PSPC1-208ENST00000635562 DIO2Q92813 273 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 PHF20Q9BVI0 1012 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 CDIP1Q9H305 208 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 PCDH18Q9HCL0 1135 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 SWAP70Q9UH65 585 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 NUDT5Q9UKK9 219 aa3.75□□□□□ -1.81
PSPC1-208ENST00000635562 NPHP3-ACAD11A0A0J9YXS1 232 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 C7orf72A4D263 438 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 PPP1R11O60927 126 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 WDHD1O75717 1129 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 RASGRP1O95267 797 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 ZBTB7AO95365 584 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 ASLP04424 464 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 TBX4P57082 545 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 AMPD3Q01432 767 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 BIRC2Q13490 618 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 B3GNT8Q7Z7M8 397 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 LRRTM3Q86VH5 581 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 NLRP10Q86W26 655 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 RPUSD2Q8IZ73 545 aaKnown RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 IFNL3Q8IZI9 196 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 CARFQ8N187 725 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 TTC9BQ8N6N2 239 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 DDX1Q92499 740 aaKnown RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 DPF3Q92784 378 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 TSPAN17Q96FV3 270 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 ORAI3Q9BRQ5 295 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 TARS2Q9BW92 718 aaKnown RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 MTFR1LQ9H019 292 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 PCDH12Q9NPG4 1184 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 NTMQ9P121 344 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 FBXL7Q9UJT9 491 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 FBXO9Q9UK97 447 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-208ENST00000635562 MAPRE3Q9UPY8 281 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 COL4A3BPQ9Y5P4 624 aa3.74□□□□□ -1.81
PSPC1-208ENST00000635562 F8W031 263 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 ANP32CO43423 234 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PRICKLE3O43900 615 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 ZNF500O60304 480 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PDE8AO60658 829 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 NPTXRO95502 500 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 CRTAMO95727 393 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms