RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 BAG5Q9UL15 447 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 GYG2O15488 501 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 PALMO75781 387 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 EXOC1LA0A1B0GW35 172 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 PIK3CAP42336 1068 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 ALKBH5Q6P6C2 394 aaKnown RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 ZNF711Q9Y462 761 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 ATP10DQ9P241 1426 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 FGGP02679 453 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 RAD23BP54727 409 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 PPP2R2AP63151 447 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 PDE1BQ01064 536 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 TAF12Q16514 161 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 POMGNT1Q8WZA1 660 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 TMEM60Q9H2L4 133 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 MBD5Q9P267 1494 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 TNNC2P02585 160 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 CA4P22748 312 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 YARSP54577 528 aaKnown RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 TRAIPQ9BWF2 469 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 CFAP65Q6ZU64 1925 aaKnown RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 MT-ND3P03897 115 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 USP14P54578 494 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 SERPINI1Q99574 410 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 ATICP31939 592 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 GABPAQ06546 454 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-211ENST00000635193 MIS12Q9H081 205 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
COL11A1-211ENST00000635193 GSTA1P08263 222 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 GSTA2P09210 222 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
COL11A1-211ENST00000635193 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MAN1A2O60476 641 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 ACSL3O95573 720 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 SAT1P21673 171 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 CASP1P29466 404 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PCDHB4Q9Y5E5 795 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 WDR91A4D1P6 747 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 TRIM49BA6NDI0 452 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 TMOD1P28289 359 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PDE6BP35913 854 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MAML1Q92585 1016 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PIGSQ96S52 555 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 hCG_1984214I3L0E3 225 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 CERKLQ49MI3 558 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MUM1L1Q5H9M0 696 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 ZNF713Q8N859 430 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
COL11A1-211ENST00000635193 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PAIP2BQ9ULR5 123 aaKnown RBP12.58□□□□□ -0.4
COL11A1-211ENST00000635193 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ZFXP17010 805 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 OCA2Q04671 838 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ICA1Q05084 483 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ARHGEF16Q5VV41 709 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ATP6V1G3Q96LB4 118 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 WDR24Q96S15 920 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 IL1RL1Q01638 556 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 CUL3Q13618 768 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 GPATCH4Q5T3I0 446 aaKnown RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ZBTB8OSQ8IWT0 167 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 AMNQ9BXJ7 453 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ETNK1Q9HBU6 452 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 PODXLO00592 558 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 TEX33O43247 280 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 KRT1P04264 644 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 SPARCL1Q14515 664 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 TRIM56Q9BRZ2 755 aaKnown RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 GEMIN8Q9NWZ8 242 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms