RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 FAM205CA6NFA0 338 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 TBX3O15119 743 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 B4GALT4O60513 344 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 CCNT1O60563 726 aaKnown RBP16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 ATG7O95352 703 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 SUPT20HL2P0C7V6 817 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 U2AF2P26368 475 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 ZNF746Q6NUN9 644 aaPredicted RBP16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 C7orf31Q8N865 590 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 TELO2Q9Y4R8 837 aa16.7■□□□□ 0.26
CDC42BPB-209ENST00000634889 KIAA0355O15063 1070 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 SLC37A4O43826 429 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 LGR5O75473 907 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 CCNE2O96020 404 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRIM50Q86XT4 487 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 ETNPPLQ8TBG4 499 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 FAM20AQ96MK3 541 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 SMARCAD1Q9H4L7 1026 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 AZI2Q9H6S1 392 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 PRDM5Q9NQX1 630 aaPredicted RBP16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 TMEM39AQ9NV64 488 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 ERAP1Q9NZ08 941 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 GTF2IRD1Q9UHL9 959 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 ZMYND8Q9ULU4 1186 aaPredicted RBP16.69■□□□□ 0.26
CDC42BPB-209ENST00000634889 IGKV6D-21A0A0A0MT36 114 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 H3BQV1 296 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 DDX39AO00148 427 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 GAS7O60861 476 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 PSMD10O75832 226 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 SYN1P17600 705 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 SLC26A2P50443 739 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 CHMP4BP1P59074 171 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 LRCH2Q5VUJ6 765 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 GLG1Q92896 1179 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 KCNMB3Q9NPA1 279 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 WDR64B1ANS9 1081 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 PDCP20941 246 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 HOXC8P31273 242 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 SFNP31947 248 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 ABHD15Q6UXT9 468 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 PLPPR4Q7Z2D5 763 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 SLFN12Q8IYM2 578 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 AFAP1L1Q8TED9 768 aa16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
CDC42BPB-209ENST00000634889 NEMFO60524 1076 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 PSAPP07602 524 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 SMIM10L2AP0DMW4 78 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 SMIM10L2BP0DMW5 78 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 STAT5BP51692 787 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 JAK3P52333 1124 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 PTGISQ16647 500 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 FAM160B1Q5W0V3 765 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 GDF6Q6KF10 455 aaPredicted RBP16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 RDM1Q8NG50 284 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 PCYT2Q99447 389 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 LBHD1Q9BQE6 289 aaPredicted RBP16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 NOD1Q9Y239 953 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 PCDHA10Q9Y5I2 948 aa16.66■□□□□ 0.26
CDC42BPB-209ENST00000634889 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 BACH1O14867 736 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 TIMP1P01033 207 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 GNAT1P11488 350 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 RAG1P15918 1043 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 B3GNT9Q6UX72 402 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 PPP1R13LQ8WUF5 828 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 RNPEPQ9H4A4 650 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 DISC1Q9NRI5 854 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 NRCAMQ92823 1304 aa16.65■□□□□ 0.26
CDC42BPB-209ENST00000634889 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 MARCH6O60337 910 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 MARK3P27448 753 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 MAGEA10P43363 369 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 CALCRLQ16602 461 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms