RNA–Protein interactions for RNA: ENST00000633671.1

LINC01002-231, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 830 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-231	ENST00000633671	LIMCH1	Q9UPQ0	1083 aa		15.09	■□□□□ 0.01
LINC01002-231	ENST00000633671	BAZ2B	Q9UIF8	2168 aa	Known RBP	15.08	■□□□□ 0.01
LINC01002-231	ENST00000633671	GGPS1	O95749	300 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	SWT1	Q5T5J6	900 aa	Known RBP	15.08	■□□□□ 0
LINC01002-231	ENST00000633671	USP17L6P	Q6QN14	398 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	SGMS1	Q86VZ5	419 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	RPUSD2	Q8IZ73	545 aa	Known RBP	15.08	■□□□□ 0
LINC01002-231	ENST00000633671	FANCB	Q8NB91	859 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	PPTC7	Q8NI37	304 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	KAT2B	Q92831	832 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	TCEANC2	Q96MN5	208 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	SPATA33	Q96N06	139 aa		15.08	■□□□□ 0
LINC01002-231	ENST00000633671	MTIF3	Q9H2K0	278 aa	Known RBP	15.08	■□□□□ 0
LINC01002-231	ENST00000633671	TTYH1	Q9H313	450 aa	Predicted RBP	15.08	■□□□□ 0
LINC01002-231	ENST00000633671	hCG_1642624	A0A1W2PR95	340 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	HSP90AA1	P07900	732 aa	Known RBP	15.07	■□□□□ 0
LINC01002-231	ENST00000633671	ZNF286B	P0CG31	522 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	UBA1	P22314	1058 aa	Known RBP	15.07	■□□□□ 0
LINC01002-231	ENST00000633671	EXOSC10	Q01780	885 aa	Known RBP	15.07	■□□□□ 0
LINC01002-231	ENST00000633671	PTGIS	Q16647	500 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	ADCK5	Q3MIX3	580 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	GNPTAB	Q3T906	1256 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	TPRN	Q4KMQ1	711 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	CELF3	Q5SZQ8	465 aa	Known RBP	15.07	■□□□□ 0
LINC01002-231	ENST00000633671	RASIP1	Q5U651	963 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	MYSM1	Q5VVJ2	828 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	TMTC3	Q6ZXV5	915 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	OTOP2	Q7RTS6	562 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	RETREG2	Q8NC44	543 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	HERVK_113	Q902F9	699 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	15.07	■□□□□ 0
LINC01002-231	ENST00000633671	ALG1	Q9BT22	464 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	KATNAL1	Q9BW62	490 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	AGXT2	Q9BYV1	514 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	MLXIP	Q9HAP2	919 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	SLC24A3	Q9HC58	644 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	RTEL1	Q9NZ71	1219 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	SCN10A	Q9Y5Y9	1956 aa		15.07	■□□□□ 0
LINC01002-231	ENST00000633671	TMEM265	A0A087WTH1	108 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	GRXCR1	A8MXD5	290 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	MEIS2	O14770	477 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	STAM2	O75886	525 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	TGFB3	P10600	412 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	MRPS9	P82933	396 aa	Known RBP	15.06	■□□□□ 0
LINC01002-231	ENST00000633671	SP2	Q02086	613 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	BFSP2	Q13515	415 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	APOA5	Q6Q788	366 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	DEFB128	Q7Z7B8	93 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	C7orf31	Q8N865	590 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	SLC17A8	Q8NDX2	589 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	INTS4	Q96HW7	963 aa	Known RBP	15.06	■□□□□ 0
LINC01002-231	ENST00000633671	CDX2	Q99626	313 aa	Predicted RBP	15.06	■□□□□ 0
LINC01002-231	ENST00000633671	PSTPIP2	Q9H939	334 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	CXXC1	Q9P0U4	656 aa	Predicted RBP	15.06	■□□□□ 0
LINC01002-231	ENST00000633671	FRMPD4	Q14CM0	1322 aa		15.06	■□□□□ 0
LINC01002-231	ENST00000633671	ZBBX	A8MT70	800 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	PIK3CD	O00329	1044 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	KIAA0753	Q2KHM9	967 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	HSDL1	Q3SXM5	330 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	GDF6	Q6KF10	455 aa	Predicted RBP	15.05	■□□□□ -0
LINC01002-231	ENST00000633671	HEATR3	Q7Z4Q2	680 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	SESTD1	Q86VW0	696 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	CCDC155	Q8N6L0	562 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	TIFA	Q96CG3	184 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	ZNF274	Q96GC6	653 aa	Predicted RBP	15.05	■□□□□ -0
LINC01002-231	ENST00000633671	INPP4A	Q96PE3	977 aa	Predicted RBP	15.05	■□□□□ -0
LINC01002-231	ENST00000633671	PBX4	Q9BYU1	374 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	UPF3B	Q9BZI7	483 aa	Known RBP	15.05	■□□□□ -0
LINC01002-231	ENST00000633671	PLSCR2	Q9NRY7	297 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	RBM28	Q9NW13	759 aa	Known RBP	15.05	■□□□□ -0
LINC01002-231	ENST00000633671	HDAC6	Q9UBN7	1215 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	BRPF3	Q9ULD4	1205 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	KIAA1217	Q5T5P2	1943 aa		15.05	■□□□□ -0
LINC01002-231	ENST00000633671	GOLGA8A	A7E2F4	631 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	GOLGA8B	A8MQT2	603 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	ZBTB43	O43298	467 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	FIBP	O43427	364 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	PPFIA4	O75335	1185 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	F2	P00734	622 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	PFKM	P08237	780 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	HOXD8	P13378	290 aa	Predicted RBP	15.04	■□□□□ -0
LINC01002-231	ENST00000633671	ICAM3	P32942	547 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	RCAN1	P53805	252 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	EVC	P57679	992 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	RTN1	Q16799	776 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	PCNX4	Q63HM2	1172 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	NLRP7	Q8WX94	980 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	MYLIP	Q8WY64	445 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	GTF2IRD1	Q9UHL9	959 aa		15.04	■□□□□ -0
LINC01002-231	ENST00000633671	NAP1L2	Q9ULW6	460 aa	Predicted RBP	15.04	■□□□□ -0
LINC01002-231	ENST00000633671	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	15.04	■□□□□ -0
LINC01002-231	ENST00000633671	CNTNAP5	Q8WYK1	1306 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	KLF18	A0A0U1RQI7	1052 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	SPATA31C2	B4DYI2	1134 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	HAS3	O00219	553 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	NOP56	O00567	594 aa	Known RBP	15.03	■□□□□ -0
LINC01002-231	ENST00000633671	IQCF3	P0C7M6	154 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	RFC2	P35250	354 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	AK2	P54819	239 aa		15.03	■□□□□ -0
LINC01002-231	ENST00000633671	NEDD9	Q14511	834 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms