RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 FBXO18Q8NFZ0 1043 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 DYNLL2Q96FJ2 89 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 HACD3Q9P035 362 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 SUCLA2Q9P2R7 463 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TOM1L1O75674 476 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 LTKP29376 864 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 PCGF5Q86SE9 256 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 C2orf69Q8N8R5 385 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 INSRP06213 1382 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 SURF1Q15526 300 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 PRPF38AQ8NAV1 312 aaKnown RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 SUN1O94901 812 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 FBXW4P57775 412 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 MECOMQ03112 1051 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 RBL2Q08999 1139 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 RNF207Q6ZRF8 634 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 PRKAB2O43741 272 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 PLA2G4BP0C869 781 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 SZRD1Q7Z422 152 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 MSTO1Q9BUK6 570 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 GOLGA8IPA6NC78 632 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 GNAT1P11488 350 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 KLC3Q6P597 504 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 INPP5FQ9Y2H2 1132 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 ATP8A1Q9Y2Q0 1164 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 C21orf2O43822 256 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 NDUFAF2Q8N183 169 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 GPR101Q96P66 508 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 ZWILCHQ9H900 591 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 PTPRTO14522 1441 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 PEX3P56589 373 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 ART3Q13508 389 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
SHPRH-211ENST00000629427 SPOPLQ6IQ16 392 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
SHPRH-211ENST00000629427 ARAP3Q8WWN8 1544 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 PPARGP37231 505 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-211ENST00000629427 ZSCAN26Q16670 478 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 FAM160B2Q86V87 743 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 STAG1Q8WVM7 1258 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 RMDN2Q96LZ7 410 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 GSDMAQ96QA5 445 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 APOEP02649 317 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHPRH-211ENST00000629427 XAB2Q9HCS7 855 aaKnown RBP12.67□□□□□ -0.38
SHPRH-211ENST00000629427 KPNA2P52292 529 aaKnown RBP12.67□□□□□ -0.38
SHPRH-211ENST00000629427 TRIM42Q8IWZ5 723 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 PLTPP55058 493 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 EXT2Q93063 718 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 FAM135BQ49AJ0 1406 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 NFKBIAP25963 317 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 CDK8P49336 464 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 CTTNQ14247 550 aaKnown RBP12.67□□□□□ -0.38
SHPRH-211ENST00000629427 PPP1R2P3Q6NXS1 205 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 NLRP10Q86W26 655 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 MAN1B1Q9UKM7 699 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 PZPP20742 1482 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 NPC1L1Q9UHC9 1359 aa12.67□□□□□ -0.38
SHPRH-211ENST00000629427 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ECEL1O95672 775 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 YWHAHQ04917 246 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 PDCD6IPQ8WUM4 868 aaKnown RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 DENND3A2RUS2 1198 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 WDR91A4D1P6 747 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 NCF2P19878 526 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 CDC25AP30304 524 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ZNF589Q86UQ0 364 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 EMILIN3Q9NT22 766 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ZMYND10O75800 440 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 MOCS3O95396 460 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms