RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 REC8O95072 547 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
UBR1-212ENST00000627960 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBR1-212ENST00000627960 IKBKEQ14164 716 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 BRF1Q92994 677 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 MXRA8Q9BRK3 442 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
UBR1-212ENST00000627960 EFCAB14O75071 495 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 CAND2O75155 1236 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 IGFBP4P22692 258 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 RPS6KB1P23443 525 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 ADAM17P78536 824 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 DEFB103AP81534 67 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
UBR1-212ENST00000627960 PPM1EQ8WY54 764 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 PGBD1Q96JS3 809 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 COL25A1Q9BXS0 654 aaPredicted RBP13.85□□□□□ -0.19
UBR1-212ENST00000627960 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 TRANK1O15050 2925 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 NRCAMQ92823 1304 aa13.85□□□□□ -0.19
UBR1-212ENST00000627960 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
UBR1-212ENST00000627960 TLL1O43897 1013 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 SCG2P13521 617 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 PSMA5P28066 241 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
UBR1-212ENST00000627960 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 TAP1Q03518 808 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
UBR1-212ENST00000627960 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 LMBR1Q8WVP7 490 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 AGXT2Q9BYV1 514 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 SMARCAD1Q9H4L7 1026 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 CERS4Q9HA82 394 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 ERAP1Q9NZ08 941 aa13.84□□□□□ -0.19
UBR1-212ENST00000627960 NID2Q14112 1375 aa13.83□□□□□ -0.19
UBR1-212ENST00000627960 RFXAPO00287 272 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 MEIS1O00470 390 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
UBR1-212ENST00000627960 ARHGEF15O94989 841 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 ARP10275 920 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 SREBF1P36956 1147 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
UBR1-212ENST00000627960 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 PLEKHG4Q58EX7 1191 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 FAM26DQ5JW98 314 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 GLG1Q92896 1179 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 JPH1Q9HDC5 661 aaPredicted RBP13.83□□□□□ -0.2
UBR1-212ENST00000627960 SLC9A2Q9UBY0 812 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 NFASCO94856 1347 aa13.83□□□□□ -0.2
UBR1-212ENST00000627960 PRRC2BQ5JSZ5 2229 aaKnown RBP13.82□□□□□ -0.2
UBR1-212ENST00000627960 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 GJB5O95377 273 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 NEFLP07196 543 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 CTSHP09668 335 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 POU3F3P20264 500 aaPredicted RBP13.82□□□□□ -0.2
UBR1-212ENST00000627960 EVCP57679 992 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 PPFIA1Q13136 1202 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
UBR1-212ENST00000627960 NTRK3Q16288 839 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 PKN1Q16512 942 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBR1-212ENST00000627960 SEPT8Q92599 483 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 PCYT2Q99447 389 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 RAD9AQ99638 391 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 SDF4Q9BRK5 362 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 OSBPL7Q9BZF2 842 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 AGO4Q9HCK5 861 aaKnown RBP13.82□□□□□ -0.2
UBR1-212ENST00000627960 PRDM6Q9NQX0 595 aa13.82□□□□□ -0.2
UBR1-212ENST00000627960 SIP14410 1827 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 LCHNA4D1U4 455 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 EPOPA6NHQ4 379 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 AMHP03971 560 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 MARK3P27448 753 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 ZNF76P36508 570 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 ACTR2P61160 394 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
UBR1-212ENST00000627960 GRIK4Q16099 956 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 NIPA1Q7RTP0 329 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 RPAINQ86UA6 219 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 CCDC12Q8WUD4 166 aaPredicted RBP13.81□□□□□ -0.2
UBR1-212ENST00000627960 ARNTL2Q8WYA1 636 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 PHKBQ93100 1093 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 ZSWIM6Q9HCJ5 1215 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
UBR1-212ENST00000627960 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
UBR1-212ENST00000627960 MBLAC1A4D2B0 266 aaPredicted RBP13.8□□□□□ -0.2
UBR1-212ENST00000627960 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms