RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ZBTB48P10074 688 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 ARP10275 920 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 CYP2C8P10632 490 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 PLCG1P19174 1290 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 NLRP12P59046 1061 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 NAALADL2Q58DX5 795 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 SNX29Q8TEQ0 813 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 LRRC15Q8TF66 581 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 STAMQ92783 540 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 PNMA5Q96PV4 448 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 MOV10L1Q9BXT6 1211 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 MAF1Q9H063 256 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 CYP39A1Q9NYL5 469 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 TRPM7Q96QT4 1865 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 PDHXO00330 501 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ITGB5P18084 799 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ERCC3P19447 782 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 CASP1P29466 404 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 SPIRE1Q08AE8 756 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 GRB10Q13322 594 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 Q3C1V9 767 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 NCAPH2Q6IBW4 605 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 SLC5A5Q92911 643 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 MTRQ99707 1265 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 ZNF577Q9BSK1 485 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 JADE2Q9NQC1 790 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 MAN1B1Q9UKM7 699 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 VAV3Q9UKW4 847 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 UBIAD1Q9Y5Z9 338 aa11.15□□□□□ -0.62
SOX2-OT-244ENST00000627738 PASKQ96RG2 1323 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 PSMD10O75832 226 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 SMC2O95347 1197 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 SLC25A27O95847 323 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 NR3C2P08235 984 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 BCRP11274 1271 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 CCND2P30279 289 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 CCT6AP40227 531 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 DPYDQ12882 1025 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 CUL4BQ13620 913 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 ECM1Q16610 540 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 TMEM119Q4V9L6 283 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 NT5DC1Q5TFE4 455 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 LRCH2Q5VUJ6 765 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 NIPA1Q7RTP0 329 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 RASAL3Q86YV0 1011 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 NSUN6Q8TEA1 469 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 SMCR8Q8TEV9 937 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 TEKT3Q9BXF9 490 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 WDR11Q9BZH6 1224 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 R3HDMLQ9H3Y0 253 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
SOX2-OT-244ENST00000627738 PFASO15067 1338 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 EML1O00423 815 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 SLC26A4O43511 780 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 GAS7O60861 476 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 MED24O75448 989 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 CAVIN2O95810 425 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 SLC10A3P09131 477 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 COPB2P35606 906 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 GCGRP47871 477 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 ZNF165P49910 485 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 ERVK-24P63145 666 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 UVSSAQ2YD98 709 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 HYIQ5T013 277 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 ERMNQ8TAM6 284 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 PTPN18Q99952 460 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms