RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CNNM2Q9H8M5 875 aa17■□□□□ 0.31
PNKP-218ENST00000625299 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
PNKP-218ENST00000625299 RWDD3Q9Y3V2 267 aa17■□□□□ 0.31
PNKP-218ENST00000625299 TRIOO75962 3097 aa17■□□□□ 0.31
PNKP-218ENST00000625299 C5orf67F2Z3F1 127 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 STXBP3O00186 592 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 LINC01565O15544 149 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 TBX10O75333 385 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
PNKP-218ENST00000625299 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
PNKP-218ENST00000625299 CTC1Q2NKJ3 1217 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 RNF135Q8IUD6 432 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 SAMD3Q8N6K7 520 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
PNKP-218ENST00000625299 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
PNKP-218ENST00000625299 CHRNA1P02708 482 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 NDUFV1P49821 464 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 MRPS9P82933 396 aaKnown RBP16.98■□□□□ 0.31
PNKP-218ENST00000625299 FAM26DQ5JW98 314 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 RUFY4Q6ZNE9 571 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 PIBF1Q8WXW3 757 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
PNKP-218ENST00000625299 TECTAO75443 2155 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 PALM3A6NDB9 673 aaPredicted RBP16.97■□□□□ 0.31
PNKP-218ENST00000625299 SPATA31C2B4DYI2 1134 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 FIBPO43427 364 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 TRAF1Q13077 416 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 SEMA3FQ13275 785 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
PNKP-218ENST00000625299 SEC23AQ15436 765 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 SLC35G1Q2M3R5 365 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 HERC4Q5GLZ8 1057 aaPredicted RBP16.97■□□□□ 0.31
PNKP-218ENST00000625299 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 INPP4AQ96PE3 977 aaPredicted RBP16.97■□□□□ 0.31
PNKP-218ENST00000625299 PHOX2BQ99453 314 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 DSCC1Q9BVC3 393 aa16.97■□□□□ 0.31
PNKP-218ENST00000625299 KIAA1671Q9BY89 1806 aa16.96■□□□□ 0.31
PNKP-218ENST00000625299 MMP1P03956 469 aa16.96■□□□□ 0.31
PNKP-218ENST00000625299 ICAM3P32942 547 aa16.96■□□□□ 0.31
PNKP-218ENST00000625299 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
PNKP-218ENST00000625299 ADAM17P78536 824 aa16.96■□□□□ 0.31
PNKP-218ENST00000625299 LPIN1Q14693 890 aa16.96■□□□□ 0.31
PNKP-218ENST00000625299 NRCAMQ92823 1304 aa16.96■□□□□ 0.3
PNKP-218ENST00000625299 ENPP3O14638 875 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 STAM2O75886 525 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 MARK3P27448 753 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 PPFIA1Q13136 1202 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 GRM4Q14833 912 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 TAF2Q6P1X5 1199 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 RSPH3Q86UC2 560 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 EDAQ92838 391 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 CLP1Q92989 425 aaKnown RBP16.95■□□□□ 0.3
PNKP-218ENST00000625299 PPP2R3CQ969Q6 453 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 RIOX1Q9H6W3 641 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
PNKP-218ENST00000625299 FRMPD4Q14CM0 1322 aa16.95■□□□□ 0.3
PNKP-218ENST00000625299 TTC3P53804 2025 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PNMA6FA0A0J9YX94 578 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 HIP1O00291 1037 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 CYTH3O43739 400 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 IBSPP21815 317 aaPredicted RBP16.94■□□□□ 0.3
PNKP-218ENST00000625299 TCF7P36402 384 aaPredicted RBP16.94■□□□□ 0.3
PNKP-218ENST00000625299 MGAT3Q09327 533 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PAN2Q504Q3 1202 aaKnown RBP16.94■□□□□ 0.3
PNKP-218ENST00000625299 ADGRD2Q7Z7M1 963 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PBXIP1Q96AQ6 731 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PLVAPQ9BX97 442 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 EHMT1Q9H9B1 1298 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 TUBE1Q9UJT0 475 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 CDY2AQ9Y6F7 541 aa16.94■□□□□ 0.3
PNKP-218ENST00000625299 MRPL42Q9Y6G3 142 aaKnown RBP16.94■□□□□ 0.3
PNKP-218ENST00000625299 TMEM221A6NGB7 291 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 M0R296 226 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
PNKP-218ENST00000625299 DGKIO75912 1065 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 IGBP1P78318 339 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 TRDNQ13061 729 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 ADAM15Q13444 863 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 CAMK1Q14012 370 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 GRIK4Q16099 956 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 RBM23Q86U06 439 aaKnown RBP16.93■□□□□ 0.3
PNKP-218ENST00000625299 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
PNKP-218ENST00000625299 ZNF689Q96CS4 500 aaPredicted RBP16.93■□□□□ 0.3
PNKP-218ENST00000625299 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
PNKP-218ENST00000625299 ERICH2A1L162 156 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 ITGB1P05556 798 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 DNAJB1P25685 340 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 CD52P31358 61 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 NRIP1P48552 1158 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 PTPN5P54829 565 aa16.92■□□□□ 0.3
PNKP-218ENST00000625299 IER5LQ5T953 404 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms