RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
LINC00552-201ENST00000625151 POLLQ9UGP5 575 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 PACSIN2Q9UNF0 486 aaPredicted RBP16.75■□□□□ 0.27
LINC00552-201ENST00000625151 KIAA1024Q9UPX6 916 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 GRIN2DO15399 1336 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 A0A087X0T9 212 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 ESYT3A0FGR9 886 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 POTECB2RU33 542 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 FAM228BP0C875 321 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 MAGEA9P43362 315 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 CARSP49589 748 aaKnown RBP16.75■□□□□ 0.27
LINC00552-201ENST00000625151 RAPGEF1Q13905 1077 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 HYIQ5T013 277 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 SCFD1Q8WVM8 642 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
LINC00552-201ENST00000625151 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
LINC00552-201ENST00000625151 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00552-201ENST00000625151 OPA1O60313 960 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 TTLL1O95922 423 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 SLC18A3Q16572 532 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 GLE1Q53GS7 698 aaKnown RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 FAM133AQ8N9E0 248 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 ZIM3Q96PE6 472 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 KCTD10Q9H3F6 313 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L10C9JJH3 530 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 FAM153BP0C7A2 387 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 PLA2G4BP0C869 781 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 FAM153CQ494X1 144 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 ALS2CLQ60I27 953 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 NT5C3AQ9H0P0 336 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 RABEP2Q9H5N1 569 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 GDF3Q9NR23 364 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
LINC00552-201ENST00000625151 FAM153AQ9UHL3 310 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
LINC00552-201ENST00000625151 KDM3AQ9Y4C1 1321 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 HSF2BPO75031 334 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
LINC00552-201ENST00000625151 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
LINC00552-201ENST00000625151 MEI1Q5TIA1 1274 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 TTC19Q6DKK2 380 aaPredicted RBP16.73■□□□□ 0.27
LINC00552-201ENST00000625151 KCTD1Q719H9 257 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 EPB41L5Q9HCM4 733 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 ADAMTS1Q9UHI8 967 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 PCDHGC5Q9Y5F6 944 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 CYP11B2P19099 503 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 CCT5P48643 541 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
LINC00552-201ENST00000625151 GNGT1P63211 74 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 GUCY2DQ02846 1103 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 KIAA0753Q2KHM9 967 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 CRY2Q49AN0 593 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 IFT20Q8IY31 132 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 RUFY1Q96T51 708 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 GANQ9H2C0 597 aa16.73■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L15C9J2P7 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L13C9JLJ4 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L11C9JVI0 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L18D6R9N7 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L22D6RA61 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L17D6RBQ6 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L19D6RCP7 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L20D6RJB6 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 F8W031 263 aaPredicted RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 ZBTB5O15062 677 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 EIF3HO15372 352 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 GNA14O95837 355 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 RNASE9P60153 205 aaKnown RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 GTF2IP78347 998 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 KLHL30Q0D2K2 578 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L24Q0WX57 530 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 USP17L6PQ6QN14 398 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 IFT81Q8WYA0 676 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 INPP4AQ96PE3 977 aaPredicted RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 LUC7LQ9NQ29 371 aaKnown RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 AIPL1Q9NZN9 384 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
LINC00552-201ENST00000625151 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 GRID2IPA4D2P6 1211 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 KRT14P02533 472 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 MMP10P09238 476 aa16.72■□□□□ 0.27
LINC00552-201ENST00000625151 SLURP2P0DP57 97 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms