RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 IPO5O00410 1097 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 FDPSP14324 419 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 CIITAP33076 1130 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 USP11P51784 963 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 ITGB3BPQ13352 177 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 BFSP2Q13515 415 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 RETREG2Q8NC44 543 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 LLPHQ9BRT6 129 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 UMODL1Q5DID0 1318 aa15.86■□□□□ 0.13
PCDHGC3-208ENST00000622836 GSTTP1A0A1W2PQM5 241 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 M0R2N6 131 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 SMIM10L2AP0DMW4 78 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 SMIM10L2BP0DMW5 78 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 CSF2RAP15509 400 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 MARK3P27448 753 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 KRT2P35908 639 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 ACTR2P61160 394 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 NPY5RQ15761 445 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 INF2Q27J81 1249 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 BACH2Q9BYV9 841 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 SMARCAD1Q9H4L7 1026 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 TBC1D22BQ9NU19 505 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 ERAP1Q9NZ08 941 aa15.85■□□□□ 0.13
PCDHGC3-208ENST00000622836 BACH1O14867 736 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 GNAT1P11488 350 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 HMGN5P82970 282 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 SHHQ15465 462 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 OXER1Q8TDS5 423 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 ATP6V0A1Q93050 837 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 SCLYQ96I15 445 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 WNT8AQ9H1J5 351 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
PCDHGC3-208ENST00000622836 TDP2O95551 362 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 ACRP10323 421 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 EPHB4P54760 987 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 ZNF200P98182 395 aaPredicted RBP15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 PTK7Q13308 1070 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 C9orf50Q5SZB4 431 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 KRT40Q6A162 431 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 MIS18BP1Q6P0N0 1132 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 NEK8Q86SG6 692 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 C8orf76Q96K31 380 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 RNPEPQ9H4A4 650 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 SETD4Q9NVD3 440 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 EMSYQ7Z589 1322 aa15.83■□□□□ 0.12
PCDHGC3-208ENST00000622836 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 MSH4O15457 936 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 GAS7O60861 476 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 MMP1P03956 469 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 MCM2P49736 904 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 FXR1P51114 621 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 STAT5BP51692 787 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 KRT76Q01546 638 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 PPFIA1Q13136 1202 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 NR5A1Q13285 461 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 Q4G0T1 1027 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 FAM160B1Q5W0V3 765 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 PSRC1Q6PGN9 363 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 DIS3L2Q8IYB7 885 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 RPUSD2Q8IZ73 545 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 TNPO1Q92973 898 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 LENG9Q96B70 501 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 TEKT3Q9BXF9 490 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 IL23AQ9NPF7 189 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 DDX25Q9UHL0 483 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
PCDHGC3-208ENST00000622836 DHX15O43143 795 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 TREHO43280 583 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 CHMP2AO43633 222 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 MARCH6O60337 910 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 CCNT1O60563 726 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 LGR5O75473 907 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 CCNE2O96020 404 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 GNL2Q13823 731 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 LRCH2Q5VUJ6 765 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 ZNF746Q6NUN9 644 aaPredicted RBP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 MOXD1Q6UVY6 613 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 NRCAMQ92823 1304 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 ZNF302Q9NR11 478 aa15.81■□□□□ 0.12
PCDHGC3-208ENST00000622836 CYP3A7-CYP3A51PA0A087WV96 503 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 BTBD18B2RXH4 712 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 EDIL3O43854 480 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 FGBP02675 491 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 PSAPP07602 524 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 IQCF3P0C7M6 154 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 SELPP16109 830 aa15.8■□□□□ 0.12
PCDHGC3-208ENST00000622836 GCFC2P16383 781 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms