RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PCIF1Q9H4Z3 704 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 ADAMTS6Q9UKP5 1117 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 TNKSO95271 1327 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 E2F8A0AVK6 867 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SCDO00767 359 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 AKAP10O43572 662 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 TSPAN6O43657 245 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 PSPNO60542 156 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 ERVFC1P60507 584 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 PPP2R5AQ15172 486 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SEC23AQ15436 765 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 TIGD5Q53EQ6 642 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 ZBTB46Q86UZ6 589 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 RASSF3Q86WH2 238 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SEC14L1Q92503 715 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 C19orf44Q9H6X5 657 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 KCNH7Q9NS40 1196 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 MBNL3Q9NUK0 354 aaKnown RBP6.6□□□□□ -1.35
CPNE3-213ENST00000622183 MYOTQ9UBF9 498 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 ZNF652Q9Y2D9 606 aa6.6□□□□□ -1.35
CPNE3-213ENST00000622183 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 CYP17A1P05093 508 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 RAC2P15153 192 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 PNLIPP16233 465 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 LSP1P33241 339 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 TRHRP34981 398 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-213ENST00000622183 ARL4AP40617 200 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 KLF1Q13351 362 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-213ENST00000622183 TUSC3Q13454 348 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 PIN1Q13526 163 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-213ENST00000622183 LRRC32Q14392 662 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 PLCL1Q15111 1095 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 CPZQ66K79 652 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-213ENST00000622183 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-213ENST00000622183 TRIM48Q8IWZ4 208 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 ZNF610Q8N9Z0 462 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 HOOK2Q96ED9 719 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 CAMKK2Q96RR4 588 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 TNFRSF12AQ9NP84 129 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 AASDHPPTQ9NRN7 309 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 ASH2LQ9UBL3 628 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 GPR160Q9UJ42 338 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 TELO2Q9Y4R8 837 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 PCDHB4Q9Y5E5 795 aa6.59□□□□□ -1.35
CPNE3-213ENST00000622183 SLC27A2O14975 620 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 SCGB1D2O95969 90 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 CYBBP04839 570 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 PTPN1P18031 435 aaKnown RBP6.58□□□□□ -1.36
CPNE3-213ENST00000622183 IARSP41252 1262 aaKnown RBP6.58□□□□□ -1.36
CPNE3-213ENST00000622183 ABCB5Q2M3G0 1257 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 MYLIPQ8WY64 445 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 TSR2Q969E8 191 aaKnown RBP6.58□□□□□ -1.36
CPNE3-213ENST00000622183 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 SLC13A1Q9BZW2 595 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 CDH19Q9H159 772 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 C14orf119Q9NWQ9 140 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 PALD1Q9ULE6 856 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
CPNE3-213ENST00000622183 WASHC2AQ641Q2 1341 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 FAM90A27PA6NNH2 459 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 SGSM2O43147 1006 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 BUB1BO60566 1050 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 WNT11O96014 354 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 C4BPAP04003 597 aaKnown RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 DBHP09172 617 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 PTX3P26022 381 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 FNTBP49356 437 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 LRRC41Q15345 812 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 ESRP1Q6NXG1 681 aaKnown RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 PAQR3Q6TCH7 311 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 ZZZ3Q8IYH5 903 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 RELTQ969Z4 430 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 TOPORSQ9NS56 1045 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 GEMIN8Q9NWZ8 242 aaKnown RBP6.57□□□□□ -1.36
CPNE3-213ENST00000622183 NUDT5Q9UKK9 219 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 SIT1Q9Y3P8 196 aa6.57□□□□□ -1.36
CPNE3-213ENST00000622183 TCRBV5S2A0A599 114 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 FZD9O00144 591 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 ABLIM3O94929 683 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 LTFP02788 710 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 MYBL2P10244 700 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 CD40P25942 277 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 SDHAP31040 664 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 ERVFRD-1P60508 538 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 KRT85P78386 507 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 TMEM132BQ14DG7 1078 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 EPHA7Q15375 998 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 PTPN21Q16825 1174 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms