RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 SPP2Q13103 211 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 DCUN1D2Q6PH85 259 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 DEFB132Q7Z7B7 95 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 MMP19Q99542 508 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 CTTNBP2NLQ9P2B4 639 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PCDHA7Q9UN72 937 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 GOLGA8HP0CJ92 632 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 STX2P32856 288 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 BPIFB4P59827 614 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 CDC42EP1Q00587 391 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 SYCE1Q8N0S2 351 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 EDC3Q96F86 508 aaKnown RBP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 FTOQ9C0B1 505 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 Q9H521 79 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 TAB2Q9NYJ8 693 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 RCAN1P53805 252 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 COG7P83436 770 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PNOCQ13519 176 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 INF2Q27J81 1249 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 SPATA1Q5VX52 437 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 SLC30A9Q6PML9 568 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 NEK9Q8TD19 979 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PSMD1Q99460 953 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 ADARB2Q9NS39 739 aaKnown RBP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 NEXMIFQ5QGS0 1516 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 KIF28PB7ZC32 967 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 INO80B-WBP1J3KQ70 363 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 PLSCR1O15162 318 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MYL3P08590 195 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 RANBP1P43487 201 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MAP3K21Q5TCX8 1036 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 SUGP1Q8IWZ8 645 aaKnown RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 PPP1R9AQ9ULJ8 1098 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MST1RQ04912 1400 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 SLC25A27O95847 323 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 RFC1P35251 1148 aaPredicted RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 GJC1P36383 396 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ASIC2Q16515 512 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 TBC1D22BQ9NU19 505 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 SERPINA10Q9UK55 444 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 KRT10P13645 584 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ANKRD20A3Q5VUR7 823 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ARMCX5Q6P1M9 558 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MAIP1Q8WWC4 291 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ANKRD36BP1Q96IX9 119 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 E9PCH4 1651 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 BBS5Q8N3I7 341 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 FOXP1Q9H334 677 aaPredicted RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 TMEM206Q9H813 350 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
COL25A1-209ENST00000622134 ZDHHC9Q9Y397 364 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
COL25A1-209ENST00000622134 MADDQ8WXG6 1647 aa11.33□□□□□ -0.59
COL25A1-209ENST00000622134 CFAP73A6NFT4 308 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 KRT76Q01546 638 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 DPCR1Q3MIW9 517 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 CAPN9O14815 690 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 STAT3P40763 770 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 GSDMBQ8TAX9 411 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TXLNGQ9NUQ3 528 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 STK17AQ9UEE5 414 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 SPOPO43791 374 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 NFKBIAP25963 317 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 NDUFA8P51970 172 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 CCDC92Q53HC0 331 aaPredicted RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
COL25A1-209ENST00000622134 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.6
COL25A1-209ENST00000622134 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms