RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CLDN3O15551 220 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 POTEIP0CG38 1075 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 GUCY1A2P33402 732 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
GGA3-223ENST00000621870 ZBTB16Q05516 673 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 CEP55Q53EZ4 464 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 SLC10A5Q5PT55 438 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 POTEDQ86YR6 584 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 WDR46O15213 610 aaKnown RBP10.08□□□□□ -0.8
GGA3-223ENST00000621870 DYNC1LI2O43237 492 aaPredicted RBP10.08□□□□□ -0.8
GGA3-223ENST00000621870 GNAT1P11488 350 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 PRELPP51888 382 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 BPIFB4P59827 614 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 PPARDQ03181 441 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 METTL23Q86XA0 190 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 TRIM50Q86XT4 487 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 RPF1Q9H9Y2 349 aaKnown RBP10.08□□□□□ -0.8
GGA3-223ENST00000621870 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
GGA3-223ENST00000621870 ZNF233A6NK53 670 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 MYO1FO00160 1098 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 CASP14P31944 242 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGA3-223ENST00000621870 MFAP3P55082 362 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 KRT81Q14533 505 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 ZNF394Q53GI3 561 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 MAP1SQ66K74 1059 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 TAB3Q8N5C8 712 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 TIGD1Q96MW7 591 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 SLITRK6Q9H5Y7 841 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 SAMSN1Q9NSI8 373 aaKnown RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 MAN1B1Q9UKM7 699 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 SPATA31D1Q6ZQQ2 1576 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 AFPP02771 609 aaKnown RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 TGFB2P61812 414 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 MAN2A1Q16706 1144 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 HADHQ16836 314 aaKnown RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 SBK1Q52WX2 424 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 DSTYKQ6XUX3 929 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 RHPN2Q8IUC4 686 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 IQCDQ96DY2 449 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 PAGE5Q96GU1 130 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 MIS12Q9H081 205 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 NYAP2Q9P242 653 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 ZNF609O15014 1411 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 KCNK3O14649 394 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 SLC16A4O15374 487 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 THAP12O43422 761 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 STAM2O75886 525 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 VEGFAP15692 232 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 ELF1P32519 619 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 CCDC89Q8N998 374 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 ATG4CQ96DT6 458 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
GGA3-223ENST00000621870 PPANQ9NQ55 473 aaKnown RBP10.07□□□□□ -0.8
GGA3-223ENST00000621870 GGPS1O95749 300 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 P4HBP07237 508 aaKnown RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 MESDQ14696 234 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 SFR1Q86XK3 245 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 LRRC4Q9HBW1 653 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 ZNF302Q9NR11 478 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 EPN1Q9Y6I3 576 aaPredicted RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 PREX1Q8TCU6 1659 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 BAZ2BQ9UIF8 2168 aaKnown RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 ASB14A6NK59 587 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 OPA1O60313 960 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 INPP5BP32019 993 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.8
GGA3-223ENST00000621870 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.06□□□□□ -0.8
GGA3-223ENST00000621870 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 TCP11Q8WWU5 503 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 ATP6V0A4Q9HBG4 840 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 RCAN1P53805 252 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 NAA35Q5VZE5 725 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 NME8Q8N427 588 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 ACER1Q8TDN7 264 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 UBE2TQ9NPD8 197 aaPredicted RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 UTP11Q9Y3A2 253 aaKnown RBP10.06□□□□□ -0.8
GGA3-223ENST00000621870 PCDHA10Q9Y5I2 948 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms