RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 A0A087WWV3 80 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 CCNE2O96020 404 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
CPNE3-212ENST00000621783 CASP1P29466 404 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 HTRA3P83110 453 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 CYP4A11Q02928 519 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 DPYDQ12882 1025 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 STX1AQ16623 288 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 DPP9Q86TI2 863 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 MAML3Q96JK9 1138 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 BLZF1Q9H2G9 400 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
CPNE3-212ENST00000621783 KBTBD4Q9NVX7 518 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 KIAA1024Q9UPX6 916 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
CPNE3-212ENST00000621783 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 MCM3APO60318 1980 aa11.94□□□□□ -0.5
CPNE3-212ENST00000621783 WDR64B1ANS9 1081 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 E9PMD0 336 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 BIN1O00499 593 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SORBS3O60504 671 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 CTGFP29279 349 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SFNP31947 248 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 VEGFBP49765 207 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 JAK3P52333 1124 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SP2Q02086 613 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 MAP2K5Q13163 448 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 CUL4BQ13620 913 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
CPNE3-212ENST00000621783 MCM6Q14566 821 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 ZNF746Q6NUN9 644 aaPredicted RBP11.93□□□□□ -0.5
CPNE3-212ENST00000621783 MAMDC4Q6UXC1 1216 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 RDM1Q8NG50 284 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 HSD17B14Q9BPX1 270 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 LXNQ9BS40 222 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
CPNE3-212ENST00000621783 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
CPNE3-212ENST00000621783 SYNGAP1Q96PV0 1343 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 TNPO2O14787 897 aaKnown RBP11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SLITRK3O94933 977 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SMC2O95347 1197 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 ARIH2O95376 493 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 MYL1P05976 194 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 MUTP22033 750 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SARSP49591 514 aaKnown RBP11.92□□□□□ -0.5
CPNE3-212ENST00000621783 NLRP12P59046 1061 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
CPNE3-212ENST00000621783 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SV2BQ7L1I2 683 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 USP6NLQ92738 828 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 BCAS3Q9H6U6 928 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 VTA1Q9NP79 307 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 ANO10Q9NW15 660 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SLC5A4Q9NY91 659 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 TELO2Q9Y4R8 837 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 LOXHD1Q8IVV2 1947 aa11.92□□□□□ -0.5
CPNE3-212ENST00000621783 GOLGA6L3A6NEY3 463 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 GGPS1O95749 300 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 HOXC6P09630 235 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 PLA2G4BP0C869 781 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 TGFB3P10600 412 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 MAP2K2P36507 400 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 RGS2P41220 211 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 FCGRTP55899 365 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 ACTR2P61160 394 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 PSMC6P62333 389 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 AMPD3Q01432 767 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 SP4Q02446 784 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 UGCGQ16739 394 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 DPCR1Q3MIW9 517 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 KCNV1Q6PIU1 500 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 MSL3Q8N5Y2 521 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms