RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 MRPS5P82675 430 aaKnown RBP6.33□□□□□ -1.4
CBWD3-215ENST00000619322 CRTC2Q53ET0 693 aaPredicted RBP6.33□□□□□ -1.4
CBWD3-215ENST00000619322 SERINC5Q86VE9 423 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 LRRC47Q8N1G4 583 aaKnown RBP6.33□□□□□ -1.4
CBWD3-215ENST00000619322 PLPP7Q8NBV4 271 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 ATP8B4Q8TF62 1192 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 TGFBRAP1Q8WUH2 860 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 BMP3P12645 472 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 SKIP12755 728 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 SEMA3FQ13275 785 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 PLEKHG4Q58EX7 1191 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 SGMS1Q86VZ5 419 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 DAGLBQ8NCG7 672 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 MSANTD3Q96H12 275 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 CDHR1Q96JP9 859 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 XPNPEP3Q9NQH7 507 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 FAM50BQ9Y247 325 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 MAP4K5Q9Y4K4 846 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
CBWD3-215ENST00000619322 AXIN1O15169 862 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 STAT2P52630 851 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 GIT2Q14161 759 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 C16orf59Q7L2K0 433 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 PLPPR4Q7Z2D5 763 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 SCFD2Q8WU76 684 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 NELL1Q92832 810 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 INPP4AQ96PE3 977 aaPredicted RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 UBE2OQ9C0C9 1292 aaKnown RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 SH3GLB2Q9NR46 395 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 IRAK3Q9Y616 596 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 PAPSS2O95340 614 aaPredicted RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 AVPP01185 164 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 EEF2P13639 858 aaKnown RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 AKR1B1P15121 316 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 KCTD2Q14681 263 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 PCNX4Q63HM2 1172 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 ZDHHC14Q8IZN3 488 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 FTHL17Q9BXU8 183 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 KRT23Q9C075 422 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 SPC25Q9HBM1 224 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 FAM13BQ9NYF5 915 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 THEGQ9P2T0 379 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 GTF2IRD1Q9UHL9 959 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 TDRD15B5MCY1 1934 aaKnown RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 FIGNL2A6NMB9 653 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 CALM1P0DP23 149 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 CALM2P0DP24 149 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 CALM3P0DP25 149 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 LIFRP42702 1097 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 TIMM10P62072 90 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 NUCB1Q02818 461 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 PPARAQ07869 468 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 ARHGAP1Q07960 439 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 RNF168Q8IYW5 571 aaPredicted RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 SUSD6Q92537 303 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 CHMP4CQ96CF2 233 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 ALG13Q9NP73 1137 aaKnown RBP6.32□□□□□ -1.4
CBWD3-215ENST00000619322 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
CBWD3-215ENST00000619322 CIITAP33076 1130 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 POLGP54098 1239 aaPredicted RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 CHAF1AQ13111 956 aaPredicted RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 B3GNT9Q6UX72 402 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 DIS3LQ8TF46 1054 aaKnown RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 TNPO1Q92973 898 aaKnown RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 CDX2Q99626 313 aaPredicted RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 WNT8AQ9H1J5 351 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 ATP13A2Q9NQ11 1180 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 AATFQ9NY61 560 aaKnown RBP eCLIP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 PRDM4Q9UKN5 801 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 PA2G4Q9UQ80 394 aaKnown RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 MAFBQ9Y5Q3 323 aaPredicted RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 SPATA31C2B4DYI2 1134 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 LPXNO60711 386 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 EIF3JO75822 258 aaKnown RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 GPNMBQ14956 572 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 EXOC8Q8IYI6 725 aa6.31□□□□□ -1.4
CBWD3-215ENST00000619322 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 POP1Q99575 1024 aaKnown RBP6.31□□□□□ -1.4
CBWD3-215ENST00000619322 PDHBP11177 359 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 SEPT2Q15019 361 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 ZNF528Q3MIS6 628 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 TMTC2Q8N394 836 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 CCDC51Q96ER9 411 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 LBHD1Q9BQE6 289 aaPredicted RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms