RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CYP3A7-CYP3A51PA0A087WV96 503 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SPDYE3A6NKU9 549 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 PITPNM1O00562 1244 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 DHX15O43143 795 aaKnown RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SLC37A4O43826 429 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CAND2O75155 1236 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 TDP2O95551 362 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 GH1P01241 217 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 TXNP10599 105 aaKnown RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 GNAT1P11488 350 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 KCNA2P16389 499 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CYP3A7P24462 503 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CIITAP33076 1130 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SLC26A2P50443 739 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 TOB1P50616 345 aaPredicted RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 RTP1P59025 263 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 LRRC26Q2I0M4 334 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 UVSSAQ2YD98 709 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CEP55Q53EZ4 464 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CELF3Q5SZQ8 465 aaKnown RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 MYSM1Q5VVJ2 828 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 PIK3AP1Q6ZUJ8 805 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 NIPA1Q7RTP0 329 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 NLRX1Q86UT6 975 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 RPUSD2Q8IZ73 545 aaKnown RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 TMEM199Q8N511 208 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SPRYD3Q8NCJ5 442 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 CAGE1Q8TC20 777 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 AFG1LQ8WV93 481 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 GPRASP2Q96D09 838 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 C8orf76Q96K31 380 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 MTG1Q9BT17 334 aaPredicted RBP5.95□□□□□ -1.46
SHMT1-211ENST00000618902 KCNH7Q9NS40 1196 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 PKD2L1Q9P0L9 805 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SMC3Q9UQE7 1217 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 MRVI1Q9Y6F6 885 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 ALPK3Q96L96 1907 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 EYSQ5T1H1 3165 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 GRIN2DO15399 1336 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 SCN10AQ9Y5Y9 1956 aa5.95□□□□□ -1.46
SHMT1-211ENST00000618902 XIRP2A4UGR9 3374 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 GSTTP1A0A1W2PQM5 241 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 ESPNB1AK53 854 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 MSH4O15457 936 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 FIBPO43427 364 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 EFCAB14O75071 495 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 SLC34A2O95436 690 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 GGPS1O95749 300 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 CCNE2O96020 404 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 TIMP1P01033 207 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 CD4P01730 458 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 XBP1P17861 261 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 SYT1P21579 422 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 U2AF2P26368 475 aaKnown RBP eCLIP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 KRT2P35908 639 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PURAQ00577 322 aaKnown RBP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 TLE2Q04725 743 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 RBL2Q08999 1139 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PPIGQ13427 754 aaKnown RBP eCLIP5.94□□□□□ -1.464e-6■■□□□ 13.5
SHMT1-211ENST00000618902 ITGA7Q13683 1181 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PKP1Q13835 747 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 NONOQ15233 471 aaKnown RBP eCLIP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 GLIPR1L2Q4G1C9 344 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 MFSD5Q6N075 450 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PSRC1Q6PGN9 363 aaPredicted RBP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 METTL7BQ6UX53 244 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 CXCL17Q6UXB2 119 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 CYFIP1Q7L576 1253 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 KRT25Q7Z3Z0 450 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PLA2G4DQ86XP0 818 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 C7orf61Q8IZ16 206 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 OR6J1Q8NGC5 347 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 ETNPPLQ8TBG4 499 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 WASF1Q92558 559 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 KAT2BQ92831 832 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 HAS1Q92839 578 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 FERMT2Q96AC1 680 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 PCYT2Q99447 389 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 TMEM60Q9H2L4 133 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 AGO4Q9HCK5 861 aaKnown RBP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 TMEM39AQ9NV64 488 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 COLQQ9Y215 455 aaPredicted RBP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 MTMR6Q9Y217 621 aa5.94□□□□□ -1.46
SHMT1-211ENST00000618902 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.94□□□□□ -1.46
SHMT1-211ENST00000618902 TTC28Q96AY4 2481 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 CCDC194A0A1B0GVG4 234 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 TPM2P07951 284 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 MMP3P08254 477 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 RAG1P15918 1043 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 ATP2B1P20020 1258 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 MAGEA10P43363 369 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 NASPP49321 788 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 USP11P51784 963 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 PSMC6P62333 389 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 SMAD3P84022 425 aaKnown RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 SETQ01105 290 aaPredicted RBP5.93□□□□□ -1.46
SHMT1-211ENST00000618902 SP4Q02446 784 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FPGSQ05932 587 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 FAAP100Q0VG06 881 aa5.93□□□□□ -1.46
SHMT1-211ENST00000618902 RESTQ13127 1097 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms