RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 EMILIN3Q9NT22 766 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 EIF4G3O43432 1585 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 PFDN6O15212 129 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CTNND1O60716 968 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 CXCR5P32302 372 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GCKP35557 465 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MAN2A1Q16706 1144 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 LRRC43Q8N309 656 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MAD1L1Q9Y6D9 718 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ADAMTS12P58397 1594 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.3□□□□□ -1.88
LPP-221ENST00000618621 PGRMC1O00264 195 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SASH3O75995 380 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 DLATP10515 647 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 TRIM50Q86XT4 487 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GPIHBP1Q8IV16 184 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PARP9Q8IXQ6 854 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SMYD4Q8IYR2 804 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 TSPYL2Q9H2G4 693 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 TRPC5Q9UL62 973 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 A0A1B0GTH6 734 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ATG16L1Q676U5 607 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KRT39Q6A163 491 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 LRRC31Q6UY01 552 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 RASGRP2Q7LDG7 609 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PCGF5Q86SE9 256 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 RAB21Q9UL25 225 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ZBTB1Q9Y2K1 713 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MAP3K15Q6ZN16 1313 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TNNI1P19237 187 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CCNE1P24864 410 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 LSP1P33241 339 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NKX1-1Q15270 411 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 DPP8Q6V1X1 898 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 PNKPQ96T60 521 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 FGFR1OP2Q9NVK5 253 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ANGPTL2Q9UKU9 493 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NOVA2Q9UNW9 492 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 CARMIL3Q8ND23 1372 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NOP56O00567 594 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 FOXN1O15353 648 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NSFP46459 744 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ASPRV1Q53RT3 343 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MIER3Q7Z3K6 550 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SPATA4Q8NEY3 305 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TMEM60Q9H2L4 133 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PLAAQ9Y263 795 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 USTQ9Y2C2 406 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PCDHB6Q9Y5E3 794 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ICE1Q9Y2F5 2266 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ERVK-7P63135 1459 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 H0YIN7 160 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 FAM133BQ5BKY9 247 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 STOX1Q6ZVD7 989 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 IGDCC4Q8TDY8 1250 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 IGFLR1Q9H665 355 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ADAMTS1Q9UHI8 967 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KDM6BO15054 1643 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 RPS6KA5O75582 802 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PRPSAP1Q14558 356 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MESDQ14696 234 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 HLFQ16534 295 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 FAM26FQ5R3K3 315 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KRT27Q7Z3Y8 459 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 EFHD1Q9BUP0 239 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ROPN1BQ9BZX4 212 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.3□□□□□ -1.885e-7■□□□□ 10.3
LPP-221ENST00000618621 ARPP21Q9UBL0 812 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 hCG_2014768A0A024R1R8 64 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SNAP23O00161 211 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SYDE1Q6ZW31 735 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 FBXO11Q86XK2 927 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ZNF513Q8N8E2 541 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 CERKQ8TCT0 537 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GRAMD1AQ96CP6 724 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 LRGUKQ96M69 825 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PHKA1P46020 1223 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 DEUP1Q05D60 604 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MTF1Q14872 753 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ERFEQ4G0M1 354 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CHP1Q99653 195 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PARVGQ9HBI0 331 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 LOC102724428A0A0B4J2F2 783 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ECEL1O95672 775 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MAPK4P31152 587 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SLC1A1P43005 524 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SIK1P57059 783 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TRIM28Q13263 835 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 ZYXQ15942 572 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 TMTC3Q6ZXV5 915 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SRLQ86TD4 932 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 HACE1Q8IYU2 909 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 HDAC6Q9UBN7 1215 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 A0A1W2PQJ5 194 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 GYG1P46976 350 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NR5A1Q13285 461 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms