RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PPFIBP2Q8ND30 876 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 TTC8Q8TAM2 541 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 RAB17Q9H0T7 212 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 CWC25Q9NXE8 425 aaPredicted RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 AMACRQ9UHK6 382 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 SERPINA10Q9UK55 444 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 GRM8O00222 908 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 ATP9AO75110 1047 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 ENTPD5O75356 428 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 DTNBP1Q96EV8 351 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 CLMNQ96JQ2 1002 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.32□□□□□ -0.285e-7■□□□□ 10.8
MATR3-227ENST00000618441 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
MATR3-227ENST00000618441 BPIFB4P59827 614 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 LRRC8CQ8TDW0 803 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 CELF4Q9BZC1 486 aaKnown RBP13.32□□□□□ -0.28
MATR3-227ENST00000618441 LRRC4CQ9HCJ2 640 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
MATR3-227ENST00000618441 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 DBR1Q9UK59 544 aaKnown RBP13.32□□□□□ -0.28
MATR3-227ENST00000618441 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 ZNF609O15014 1411 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 SALL1Q9NSC2 1324 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 NVLO15381 856 aaKnown RBP13.32□□□□□ -0.28
MATR3-227ENST00000618441 SERPINB3P29508 390 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 ERVK-9P63128 1117 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 MAP7D3Q8IWC1 876 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 FAM129AQ9BZQ8 928 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
MATR3-227ENST00000618441 TRIM75PA6NK02 468 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 CYP27B1O15528 508 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 RARAP10276 462 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 PTPREP23469 700 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 PEX5P50542 639 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 RIPK1Q13546 671 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 FBXO9Q9UK97 447 aaPredicted RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 SKIP12755 728 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 COG7P83436 770 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 PDE1CQ14123 709 aaPredicted RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 RAB3IPQ96QF0 476 aaPredicted RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 TECPR2O15040 1411 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 KRIT1O00522 736 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 PTDSS1P48651 473 aaKnown RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 PLTPP55058 493 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 CBX3Q13185 183 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 DDB1Q16531 1140 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 DNAJC1Q96KC8 554 aaKnown RBP13.31□□□□□ -0.28
MATR3-227ENST00000618441 EXOC1Q9NV70 894 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 ETNK2Q9NVF9 386 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 ATXN10Q9UBB4 475 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 HAO1Q9UJM8 370 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
MATR3-227ENST00000618441 A0A087X0B3 334 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 BAG2O95816 211 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 PRCPP42785 496 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 SLC1A4P43007 532 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 C10orf62Q5T681 223 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 CYTH2Q99418 400 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 FBXO2Q9UK22 296 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 HDAC9Q9UKV0 1011 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 SH3BGRP55822 239 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 CABP4P57796 275 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 LLGL1Q15334 1064 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 PALB2Q86YC2 1186 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 TLR10Q9BXR5 811 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 PLCB1Q9NQ66 1216 aa13.3□□□□□ -0.28
MATR3-227ENST00000618441 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
MATR3-227ENST00000618441 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms