RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ELP3Q9H9T3 547 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
CIITA-213ENST00000618327 CAP2P40123 477 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 ALCAMQ13740 583 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 ABT1Q9ULW3 272 aaKnown RBP15.19■□□□□ 0.02
CIITA-213ENST00000618327 ATP2C2O75185 946 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 TNNC2P02585 160 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 P4HBP07237 508 aaKnown RBP15.19■□□□□ 0.02
CIITA-213ENST00000618327 ETF1P62495 437 aaKnown RBP15.19■□□□□ 0.02
CIITA-213ENST00000618327 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 FBXO41Q8TF61 875 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 NAP1L3Q99457 506 aaPredicted RBP15.19■□□□□ 0.02
CIITA-213ENST00000618327 TEX13BQ9BXU2 312 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 NDST4Q9H3R1 872 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 TRIM49BA6NDI0 452 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 HSF2BPO75031 334 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 ABCD1P33897 745 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 GSTA5Q7RTV2 222 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 AP5M1Q9H0R1 490 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 KCNQ5Q9NR82 932 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 TMEM191BP0C7N4 346 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 P4HA1P13674 534 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 VAV2P52735 878 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 RNASE9P60153 205 aaKnown RBP15.18■□□□□ 0.02
CIITA-213ENST00000618327 YWHAEP62258 255 aaKnown RBP15.18■□□□□ 0.02
CIITA-213ENST00000618327 USP49Q70CQ1 688 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 FASTKD5Q7L8L6 764 aaKnown RBP15.18■□□□□ 0.02
CIITA-213ENST00000618327 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 FBF1Q8TES7 1133 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 ATRIPQ8WXE1 791 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 SFNP31947 248 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 QARSP47897 775 aaKnown RBP15.18■□□□□ 0.02
CIITA-213ENST00000618327 PEX3P56589 373 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 COASYQ13057 564 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 SYCE1Q8N0S2 351 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 UBL4BQ8N7F7 174 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 PSMB7Q99436 277 aa15.18■□□□□ 0.02
CIITA-213ENST00000618327 MMP14P50281 582 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 NBPF9Q3BBW0 867 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 APOBEC3HQ6NTF7 200 aaKnown RBP15.17■□□□□ 0.02
CIITA-213ENST00000618327 GIMAP8Q8ND71 665 aaPredicted RBP15.17■□□□□ 0.02
CIITA-213ENST00000618327 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 EIF2AK1Q9BQI3 630 aaKnown RBP15.17■□□□□ 0.02
CIITA-213ENST00000618327 PEX26Q7Z412 305 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 TRIM58Q8NG06 486 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 ABCB4P21439 1286 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 GRIK5Q16478 980 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 FAM208AQ9UK61 1670 aaKnown RBP15.17■□□□□ 0.02
CIITA-213ENST00000618327 EBAG9O00559 213 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 DCUN1D2Q6PH85 259 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 IFT81Q8WYA0 676 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 LXNQ9BS40 222 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 DDX4Q9NQI0 724 aaKnown RBP15.17■□□□□ 0.02
CIITA-213ENST00000618327 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
CIITA-213ENST00000618327 STAMBPO95630 424 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 VPS33BQ9H267 617 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 TMEM60Q9H2L4 133 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 SLIT2O94813 1529 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 MARK3P27448 753 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 CA8P35219 290 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 ECE1P42892 770 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
CIITA-213ENST00000618327 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 PSMD1Q99460 953 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 ZNF215Q9UL58 517 aaPredicted RBP15.16■□□□□ 0.02
CIITA-213ENST00000618327 SHMT1P34896 483 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 RASSF7Q02833 373 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 BAATQ14032 418 aaPredicted RBP15.16■□□□□ 0.02
CIITA-213ENST00000618327 EPHA7Q15375 998 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 MICALL1Q8N3F8 863 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 NT5C1BQ96P26 610 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 BZW2Q9Y6E2 419 aaKnown RBP15.16■□□□□ 0.02
CIITA-213ENST00000618327 TBX3O15119 743 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 CEP104O60308 925 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 ZBED6P86452 979 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 NEDD9Q14511 834 aa15.16■□□□□ 0.02
CIITA-213ENST00000618327 GAKO14976 1311 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 FAM170AA1A519 330 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 SNX16P57768 344 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 PROM2Q8N271 834 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 MB21D1Q8N884 522 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 MYRIPQ8NFW9 859 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 CCDC26Q8TAB7 109 aa15.15■□□□□ 0.02
CIITA-213ENST00000618327 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms