RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 MAN2A1Q16706 1144 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 Q4G0T1 1027 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 ZNF397Q8NF99 534 aaPredicted RBP13.73□□□□□ -0.21
CIITA-212ENST00000618207 DYDC2Q96IM9 177 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 TTYH3Q9C0H2 523 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 NFIBO00712 420 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 TADA3O75528 432 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 MYBP10242 640 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 ALAS1P13196 640 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 HERVK_113P62684 666 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 PSMD2Q13200 908 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 ADAM9Q13443 819 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 GIT2Q14161 759 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 HYIQ5T013 277 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 CACNA2D4Q7Z3S7 1137 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 MBOAT7Q96N66 472 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 MYH10P35580 1976 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 FAM170AA1A519 330 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 CTAGE9A4FU28 777 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 CLIC2O15247 247 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 ASNSP08243 561 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 ZBED6P86452 979 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 DMTNQ08495 405 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 LACRTQ9GZZ8 138 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
CIITA-212ENST00000618207 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 RABGAP1Q9Y3P9 1069 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 GAS7O60861 476 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
CIITA-212ENST00000618207 GCNT3O95395 438 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
CIITA-212ENST00000618207 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 PLS1Q14651 629 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
CIITA-212ENST00000618207 FECHP22830 423 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 NR2F2P24468 414 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 PRKG1Q13976 671 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
CIITA-212ENST00000618207 PCDHA2Q9Y5H9 948 aa13.72□□□□□ -0.21
CIITA-212ENST00000618207 NFKBIEO00221 500 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 SRGAP2O75044 1071 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 MMP14P50281 582 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 CLCN6P51797 869 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.21
CIITA-212ENST00000618207 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 MOXD1Q6UVY6 613 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 MICALL2Q8IY33 904 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 NUP58Q9BVL2 599 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.21
CIITA-212ENST00000618207 SIK3Q9Y2K2 1263 aa13.71□□□□□ -0.21
CIITA-212ENST00000618207 MRPL11Q9Y3B7 192 aaKnown RBP13.71□□□□□ -0.21
CIITA-212ENST00000618207 FLOT1O75955 427 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 EPS15P42566 896 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 OTOP1Q7RTM1 612 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 SYT2Q8N9I0 419 aaPredicted RBP13.71□□□□□ -0.22
CIITA-212ENST00000618207 NEK11Q8NG66 645 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 IL31RAQ8NI17 732 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 COL20A1Q9P218 1284 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 SAMM50Q9Y512 469 aa13.71□□□□□ -0.22
CIITA-212ENST00000618207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.22
CIITA-212ENST00000618207 TBX3O15119 743 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 CIITAP33076 1130 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 CEP55Q53EZ4 464 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 FAM83AQ86UY5 434 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 CAPZA3Q96KX2 299 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 NAPGQ99747 312 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 WRAP73Q9P2S5 460 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 AKR1B10O60218 316 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 SLITRK3O94933 977 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms