RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PXMP2Q9NR77 195 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 MRPL11Q9Y3B7 192 aaKnown RBP9.88□□□□□ -0.83
GPC6-202ENST00000617456 MICAL3Q7RTP6 2002 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 NEDD4P46934 1319 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.87□□□□□ -0.83
GPC6-202ENST00000617456 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 TREHO43280 583 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 CTNNB1P35222 781 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 IRS1P35568 1242 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 TERF1P54274 439 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 GHRHRQ02643 423 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 HSDL1Q3SXM5 330 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 PLEKHG4Q58EX7 1191 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 CELF3Q5SZQ8 465 aaKnown RBP9.87□□□□□ -0.83
GPC6-202ENST00000617456 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
GPC6-202ENST00000617456 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 ADHFE1Q8IWW8 467 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 ENAHQ8N8S7 591 aaPredicted RBP9.87□□□□□ -0.83
GPC6-202ENST00000617456 TOP1MTQ969P6 601 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 MFSD14AQ96MC6 490 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 MAP3K14Q99558 947 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 UBAC1Q9BSL1 405 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 UPF3BQ9BZI7 483 aaKnown RBP9.87□□□□□ -0.83
GPC6-202ENST00000617456 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 MUTYHQ9UIF7 546 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 ZNF318Q5VUA4 2279 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 WDFY4Q6ZS81 3184 aa9.87□□□□□ -0.83
GPC6-202ENST00000617456 MYH7BA7E2Y1 1941 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 RGS20O76081 388 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 PARP1P09874 1014 aaKnown RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 SMIM10L2AP0DMW4 78 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 SMIM10L2BP0DMW5 78 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 CHMLP26374 656 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 PDE4AP27815 886 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 HOXA13P31271 388 aaPredicted RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 ANAPC15P60006 121 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 SP2Q02086 613 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 SART3Q15020 963 aaKnown RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
GPC6-202ENST00000617456 FIBCD1Q8N539 461 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 IL31RAQ8NI17 732 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
GPC6-202ENST00000617456 MTMR8Q96EF0 704 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 IL17RAQ96F46 866 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 PHOX2BQ99453 314 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 PDCD2LQ9BRP1 358 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 C16orf70Q9BSU1 422 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 KCNH6Q9H252 994 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 IGFLR1Q9H665 355 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 MLXIPQ9HAP2 919 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 KIAA1217Q5T5P2 1943 aa9.86□□□□□ -0.83
GPC6-202ENST00000617456 ZDBF2Q9HCK1 2354 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 B4E1Z4 1266 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 H3BRB1 525 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 GRM6O15303 877 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 SGSM2O43147 1006 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
GPC6-202ENST00000617456 SMARCA1P28370 1054 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
GPC6-202ENST00000617456 LTBRP36941 435 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 HSD17B4P51659 736 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 DLX2Q07687 328 aaPredicted RBP9.85□□□□□ -0.83
GPC6-202ENST00000617456 DMTNQ08495 405 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 HYAL1Q12794 435 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 SEC23AQ15436 765 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 RNF135Q8IUD6 432 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 MAP4K1Q92918 833 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
GPC6-202ENST00000617456 BCAS3Q9H6U6 928 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 JMJD4Q9H9V9 463 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 SETD4Q9NVD3 440 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 TECTAO75443 2155 aa9.85□□□□□ -0.83
GPC6-202ENST00000617456 ERICH2A1L162 156 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
GPC6-202ENST00000617456 STXBP3O00186 592 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 NOP56O00567 594 aaKnown RBP9.84□□□□□ -0.83
GPC6-202ENST00000617456 OPLAHO14841 1288 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 MBTPS2O43462 519 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 NCK2O43639 380 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 LGALS2P05162 132 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 CCND2P30279 289 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 BMPR1AP36894 532 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 COL19A1Q14993 1142 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 PGM5Q15124 567 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 SMAD2Q15796 467 aaKnown RBP9.84□□□□□ -0.83
GPC6-202ENST00000617456 KCNV1Q6PIU1 500 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 FCHSD1Q86WN1 690 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 GPATCH11Q8N954 259 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 NCOA7Q8NI08 942 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 POP1Q99575 1024 aaKnown RBP9.84□□□□□ -0.83
GPC6-202ENST00000617456 AMNQ9BXJ7 453 aa9.84□□□□□ -0.83
GPC6-202ENST00000617456 RNPEPQ9H4A4 650 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms