RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 DENND5AQ6IQ26 1287 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
NEAT1-205ENST00000616315 AFAP1L2Q8N4X5 818 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 NPLOC4Q8TAT6 608 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 SCLYQ96I15 445 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 LOXL4Q96JB6 756 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 MAGEB10Q96LZ2 347 aaPredicted RBP5.95□□□□□ -1.46
NEAT1-205ENST00000616315 SORCS2Q96PQ0 1159 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 SRRDQ9UH36 339 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 TRAF6Q9Y4K3 522 aa5.95□□□□□ -1.46
NEAT1-205ENST00000616315 ASXL2Q76L83 1435 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 RASGRP1O95267 797 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 NPTXRO95502 500 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 CPEP16870 476 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 SEPHS1P49903 392 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 NEK4P51957 841 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 TESK1Q15569 626 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 E4F1Q66K89 784 aaPredicted RBP5.94□□□□□ -1.46
NEAT1-205ENST00000616315 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 RSPO2Q6UXX9 243 aaPredicted RBP5.94□□□□□ -1.46
NEAT1-205ENST00000616315 LEO1Q8WVC0 666 aaPredicted RBP5.94□□□□□ -1.46
NEAT1-205ENST00000616315 TSPAN17Q96FV3 270 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 SAMD11Q96NU1 681 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 ZFYVE21Q9BQ24 234 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 PHF20Q9BVI0 1012 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 NTMQ9P121 344 aa5.94□□□□□ -1.46
NEAT1-205ENST00000616315 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 FAM83GA6ND36 823 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 B4E1Z4 1266 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 ALG1L2C9J202 215 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 OVOL3O00110 214 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 MARCH6O60337 910 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 KPNA6O60684 536 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 PPP1R11O60927 126 aaPredicted RBP5.93□□□□□ -1.46
NEAT1-205ENST00000616315 CRTAMO95727 393 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 PLATP00750 562 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 JMJD7P0C870 316 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 LTBRP36941 435 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 GPR85P60893 370 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 KCNAB2Q13303 367 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 SMAD4Q13485 552 aaKnown RBP5.93□□□□□ -1.46
NEAT1-205ENST00000616315 EEF1DP3Q658K8 133 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 PKN3Q6P5Z2 889 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 KCNT2Q6UVM3 1135 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
NEAT1-205ENST00000616315 MTDHQ86UE4 582 aaKnown RBP5.93□□□□□ -1.46
NEAT1-205ENST00000616315 TTC9BQ8N6N2 239 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 ATL2Q8NHH9 583 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 ADAMTS17Q8TE56 1095 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 ZBTB8AQ96BR9 441 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 CEP89Q96ST8 783 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 SSBP3Q9BWW4 388 aaPredicted RBP5.93□□□□□ -1.46
NEAT1-205ENST00000616315 GPRC5CQ9NQ84 441 aa5.93□□□□□ -1.46
NEAT1-205ENST00000616315 TBC1D8O95759 1140 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 PLS3P13797 630 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 EVA1CP58658 441 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 CACNB2Q08289 660 aaPredicted RBP5.92□□□□□ -1.46
NEAT1-205ENST00000616315 DHCR24Q15392 516 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 CFAP100Q494V2 611 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 UBE2R2Q712K3 238 aaPredicted RBP5.92□□□□□ -1.46
NEAT1-205ENST00000616315 IFNL3Q8IZI9 196 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 Q8N1X5 172 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.92□□□□□ -1.46
NEAT1-205ENST00000616315 GPR27Q9NS67 375 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 CLEC1BQ9P126 229 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 PCDHA9Q9Y5H5 950 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 NPFFR2Q9Y5X5 522 aa5.92□□□□□ -1.46
NEAT1-205ENST00000616315 TRBV23OR9-2A0A075B6M9 112 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 SLPIP03973 132 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 EXOSC10Q01780 885 aaKnown RBP5.91□□□□□ -1.46
NEAT1-205ENST00000616315 STRN3Q13033 797 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 PCBP1Q15365 356 aaKnown RBP eCLIP5.91□□□□□ -1.46
NEAT1-205ENST00000616315 ODR4Q5SWX8 454 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 IQCEQ6IPM2 695 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 ZCCHC8Q6NZY4 707 aaKnown RBP5.91□□□□□ -1.46
NEAT1-205ENST00000616315 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 SPRED1Q7Z699 444 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 STRA8Q7Z7C7 330 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 CCDC103Q8IW40 242 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 DIO2Q92813 273 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 DDX11Q96FC9 970 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
NEAT1-205ENST00000616315 RWDD3Q9Y3V2 267 aa5.91□□□□□ -1.46
NEAT1-205ENST00000616315 ARVCFO00192 962 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 EYA4O95677 639 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 C6P13671 934 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 PAMP19021 973 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 FAM50AQ14320 339 aaKnown RBP5.9□□□□□ -1.46
NEAT1-205ENST00000616315 SEPT7Q16181 437 aaKnown RBP5.9□□□□□ -1.46
NEAT1-205ENST00000616315 BRDTQ58F21 947 aaPredicted RBP5.9□□□□□ -1.46
NEAT1-205ENST00000616315 PIK3R6Q5UE93 754 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 CDCA2Q69YH5 1023 aaPredicted RBP5.9□□□□□ -1.46
NEAT1-205ENST00000616315 DDX53Q86TM3 631 aaKnown RBP5.9□□□□□ -1.46
NEAT1-205ENST00000616315 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
NEAT1-205ENST00000616315 MTFR1LQ9H019 292 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms