RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 BMP2KQ9NSY1 1161 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-208ENST00000614678 SIP14410 1827 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 HAS3O00219 553 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 NBNO60934 754 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 TIMP1P01033 207 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 SMIM10L2AP0DMW4 78 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 SMIM10L2BP0DMW5 78 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 LETM2Q2VYF4 491 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 METTL7BQ6UX53 244 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 LMBR1Q8WVP7 490 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 TBC1D32Q96NH3 1257 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 Q9Y3F1 56 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 KAT6AQ92794 2004 aa6.5□□□□□ -1.37
CPNE3-208ENST00000614678 CCDC196A0A1B0GTZ2 297 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 EML1O00423 815 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 KIAA0355O15063 1070 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 CSDE1O75534 798 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 DEXIO95424 95 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ICAM3P32942 547 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ACTR2P61160 394 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZNF618Q5T7W0 954 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TDHQ8IZJ6 230 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 BLIDQ8IZY5 108 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZNF579Q8NAF0 562 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 SPRYD3Q8NCJ5 442 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 CDHR5Q9HBB8 845 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 POLD4Q9HCU8 107 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 NOP56O00567 594 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZNF76P36508 570 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 AKAP17AQ02040 695 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 LAMC2Q13753 1193 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TMEM240Q5SV17 173 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 FAM117BQ6P1L5 589 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 POTEDQ86YR6 584 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 CHAMP1Q96JM3 812 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 PRRC2BQ5JSZ5 2229 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZNF862O60290 1169 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 RCAN1P53805 252 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 DRP2Q13474 957 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 KRT40Q6A162 431 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 C6orf50Q9HD87 102 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 DMDP11532 3685 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 BRWD1Q9NSI6 2320 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZBTB42B2RXF5 422 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 IPO5O00410 1097 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 HOXD8P13378 290 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TRIM71Q2Q1W2 868 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 SWSAP1Q6NVH7 229 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 C7orf31Q8N865 590 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 HAS1Q92839 578 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 EMID1Q96A84 441 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TOX2Q96NM4 488 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 ZNF577Q9BSK1 485 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TMEM60Q9H2L4 133 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 TTYH1Q9H313 450 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 JPH1Q9HDC5 661 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 MAP3K20Q9NYL2 800 aaKnown RBP6.49□□□□□ -1.37
CPNE3-208ENST00000614678 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
CPNE3-208ENST00000614678 EPB41L2O43491 1005 aaKnown RBP6.48□□□□□ -1.37
CPNE3-208ENST00000614678 PPFIA4O75335 1185 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 CKBP12277 381 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 MFSD5Q6N075 450 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 TRIM22Q8IYM9 498 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 GLG1Q92896 1179 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 LBHD1Q9BQE6 289 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-208ENST00000614678 UNC45AQ9H3U1 944 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 SLC9A2Q9UBY0 812 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 RFXAPO00287 272 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 DEFB103AP81534 67 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 FPGSQ05932 587 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 PLCB4Q15147 1175 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 TMEM266Q2M3C6 531 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 FAM173BQ6P4H8 233 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 FAM49AQ9H0Q0 323 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-208ENST00000614678 PNMA2Q9UL42 364 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 MYO15AQ9UKN7 3530 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 CUL9Q8IWT3 2517 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 ESYT2A0FGR8 921 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 NKRFO15226 690 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPNE3-208ENST00000614678 TGFB3P10600 412 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 INSRRP14616 1297 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 ADAM17P78536 824 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.48□□□□□ -1.377e-6■□□□□ 10.8
CPNE3-208ENST00000614678 DIS3L2Q8IYB7 885 aaKnown RBP6.48□□□□□ -1.37
CPNE3-208ENST00000614678 BANK1Q8NDB2 785 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 DNAJB3Q8WWF6 145 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 ATP6V0A1Q93050 837 aa6.48□□□□□ -1.37
CPNE3-208ENST00000614678 FTOQ9C0B1 505 aaKnown RBP eCLIP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms