RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DIAPH2O60879 1101 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 ERFP50548 548 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 MECOMQ03112 1051 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 PSMD1Q99460 953 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 TNS3Q68CZ2 1445 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 ACSL3O95573 720 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 PABPC4Q13310 644 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDH5-208ENST00000614547 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 SHISA4Q96DD7 197 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 E9PMD0 336 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 BIRC2Q13490 618 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SNX1Q13596 522 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 DAAM1Q9Y4D1 1078 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 UPP2O95045 317 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 GCNT3O95395 438 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
CDH5-208ENST00000614547 SLC16A2P36021 539 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SCTRP47872 440 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SIK1P57059 783 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
CDH5-208ENST00000614547 NAALADL2Q58DX5 795 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 FAM47EQ6ZV65 393 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 PHLDB2Q86SQ0 1253 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 NSMCE1Q8WV22 266 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 GLG1Q92896 1179 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SPOPO43791 374 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 BAG3O95817 575 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 CHN1P15882 459 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 CALCOCO2Q13137 446 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 EXOC3L4Q17RC7 722 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
CDH5-208ENST00000614547 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
CDH5-208ENST00000614547 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
CDH5-208ENST00000614547 SLC9A1P19634 815 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 FGFR4P22455 802 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 SMTNP53814 917 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 ATP11AP98196 1134 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 KCNB1Q14721 858 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.35
CDH5-208ENST00000614547 CHMP6Q96FZ7 201 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 PRMT1Q99873 361 aaKnown RBP12.83□□□□□ -0.35
CDH5-208ENST00000614547 DONSONQ9NYP3 566 aa12.83□□□□□ -0.35
CDH5-208ENST00000614547 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 PDHA1P08559 390 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 XRCC5P13010 732 aaKnown RBP12.83□□□□□ -0.36
CDH5-208ENST00000614547 PPP1R2P41236 205 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
CDH5-208ENST00000614547 CYP2J2P51589 502 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 GJB7Q6PEY0 223 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
CDH5-208ENST00000614547 EYA3Q99504 573 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 PKD2L1Q9P0L9 805 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 MYH8P13535 1937 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 MESDQ14696 234 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 KIAA0895Q8NCT3 520 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 SH3GL2Q99962 352 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 MYH10P35580 1976 aa12.83□□□□□ -0.36
CDH5-208ENST00000614547 TRIM37O94972 964 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 ADCY7P51828 1080 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 MEA1Q16626 185 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
CDH5-208ENST00000614547 CLEC10AQ8IUN9 316 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 TAB3Q8N5C8 712 aaPredicted RBP12.82□□□□□ -0.36
CDH5-208ENST00000614547 USP38Q8NB14 1042 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 FBF1Q8TES7 1133 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 ZMYND12Q9H0C1 365 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 CPP00450 1065 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 STX2P32856 288 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 FLT3P36888 993 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 LRRC27Q9C0I9 530 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 SHOX2O60902 331 aaPredicted RBP12.82□□□□□ -0.36
CDH5-208ENST00000614547 CAND2O75155 1236 aa12.82□□□□□ -0.36
CDH5-208ENST00000614547 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms