RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 NUCB1Q02818 461 aa27.13■■□□□ 1.93
MMP28-203ENST00000612672 CLUL1Q15846 466 aa27.13■■□□□ 1.93
MMP28-203ENST00000612672 UTP14CQ5TAP6 766 aaKnown RBP27.13■■□□□ 1.93
MMP28-203ENST00000612672 TECTAO75443 2155 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 CTNNB1P35222 781 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 GTF2F1P35269 517 aaKnown RBP eCLIP27.12■■□□□ 1.93
MMP28-203ENST00000612672 ARHGAP4P98171 946 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 HYAL1Q12794 435 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 CTC1Q2NKJ3 1217 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 USP26Q9BXU7 913 aa27.12■■□□□ 1.93
MMP28-203ENST00000612672 CSPG5O95196 566 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 GHRP10912 638 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 IRS1P35568 1242 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 SP4Q02446 784 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 MGAT3Q09327 533 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 PIBF1Q8WXW3 757 aa27.11■■□□□ 1.93
MMP28-203ENST00000612672 C5orf67F2Z3F1 127 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 TROAPQ12815 778 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 ADHFE1Q8IWW8 467 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 APBB2Q92870 758 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 IL17RAQ96F46 866 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 EHMT1Q9H9B1 1298 aa27.1■■□□□ 1.93
MMP28-203ENST00000612672 PNMA6FA0A0J9YX94 578 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 TBX10O75333 385 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 NHLH1Q02575 133 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 NEDD9Q14511 834 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 LPIN1Q14693 890 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 GNPTABQ3T906 1256 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 FIBCD1Q8N539 461 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 LINC01599Q8WXQ3 324 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 FBXL18Q96ME1 805 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 PRKAG3Q9UGI9 489 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 ADGRA3Q8IWK6 1321 aa27.09■■□□□ 1.93
MMP28-203ENST00000612672 HIP1O00291 1037 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 LINC01565O15544 149 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 FIBPO43427 364 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 CAMK1Q14012 370 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 USP17L6PQ6QN14 398 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 HFE2Q6ZVN8 426 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 ZBTB10Q96DT7 871 aa27.08■■□□□ 1.93
MMP28-203ENST00000612672 CYP21A2P08686 494 aa27.07■■□□□ 1.92
MMP28-203ENST00000612672 BMPR1AP36894 532 aa27.07■■□□□ 1.92
MMP28-203ENST00000612672 MRE11P49959 708 aa27.07■■□□□ 1.92
MMP28-203ENST00000612672 CSPP1Q1MSJ5 1256 aa27.07■■□□□ 1.92
MMP28-203ENST00000612672 PLXNA4Q9HCM2 1894 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 MBTPS2O43462 519 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 ATP9AO75110 1047 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 GNAT1P11488 350 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 PTH1RQ03431 593 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 SMAD2Q15796 467 aaKnown RBP27.06■■□□□ 1.92
MMP28-203ENST00000612672 CLP1Q92989 425 aaKnown RBP27.06■■□□□ 1.92
MMP28-203ENST00000612672 ZNF689Q96CS4 500 aaPredicted RBP27.06■■□□□ 1.92
MMP28-203ENST00000612672 MUTYHQ9UIF7 546 aa27.06■■□□□ 1.92
MMP28-203ENST00000612672 IFIT3O14879 490 aaKnown RBP27.05■■□□□ 1.92
MMP28-203ENST00000612672 STAM2O75886 525 aa27.05■■□□□ 1.92
MMP28-203ENST00000612672 ANTXR2P58335 489 aa27.05■■□□□ 1.92
MMP28-203ENST00000612672 ZNF215Q9UL58 517 aaPredicted RBP27.05■■□□□ 1.92
MMP28-203ENST00000612672 ENPP3O14638 875 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 MEIS2O14770 477 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 GSPT1P15170 499 aaKnown RBP27.04■■□□□ 1.92
MMP28-203ENST00000612672 DNAJB1P25685 340 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 TCF7P36402 384 aaPredicted RBP27.04■■□□□ 1.92
MMP28-203ENST00000612672 MARCH8Q5T0T0 291 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 PCNX4Q63HM2 1172 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 C11orf84Q9BUA3 381 aaPredicted RBP27.04■■□□□ 1.92
MMP28-203ENST00000612672 LMAN2LQ9H0V9 348 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 RWDD1Q9H446 243 aaPredicted RBP27.04■■□□□ 1.92
MMP28-203ENST00000612672 NRCAMQ92823 1304 aa27.04■■□□□ 1.92
MMP28-203ENST00000612672 GSTTP1A0A1W2PQM5 241 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 RB1P06400 928 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 KCNA2P16389 499 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 MARK3P27448 753 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 FBXO47Q5MNV8 452 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 SENP7Q9BQF6 1050 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 AGO3Q9H9G7 860 aaKnown RBP27.03■■□□□ 1.92
MMP28-203ENST00000612672 ALG13Q9NP73 1137 aaKnown RBP27.03■■□□□ 1.92
MMP28-203ENST00000612672 FAM50BQ9Y247 325 aa27.03■■□□□ 1.92
MMP28-203ENST00000612672 MYO15AQ9UKN7 3530 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 MMP1P03956 469 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 WTAPQ15007 396 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 DNAJB3Q8WWF6 145 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 MYL10Q9BUA6 226 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 IGFLR1Q9H665 355 aa27.02■■□□□ 1.92
MMP28-203ENST00000612672 MRPL42Q9Y6G3 142 aaKnown RBP27.02■■□□□ 1.92
MMP28-203ENST00000612672 PDE4AP27815 886 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 TRAF1Q13077 416 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 PPFIA1Q13136 1202 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 GRIK4Q16099 956 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 ADGRD2Q7Z7M1 963 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 RTN4RL1Q86UN2 441 aaPredicted RBP27.01■■□□□ 1.91
MMP28-203ENST00000612672 CRIPAKQ8N1N5 446 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 CDY2AQ9Y6F7 541 aa27.01■■□□□ 1.91
MMP28-203ENST00000612672 MBLAC1A4D2B0 266 aaPredicted RBP27■■□□□ 1.91
MMP28-203ENST00000612672 E7EWF7 191 aa27■■□□□ 1.91
MMP28-203ENST00000612672 DGKIO75912 1065 aa27■■□□□ 1.91
MMP28-203ENST00000612672 ITGB5P18084 799 aa27■■□□□ 1.91
MMP28-203ENST00000612672 SMAD4Q13485 552 aaKnown RBP27■■□□□ 1.91
MMP28-203ENST00000612672 COL9A3Q14050 684 aaPredicted RBP27■■□□□ 1.91
MMP28-203ENST00000612672 BTG3Q14201 252 aaPredicted RBP27■■□□□ 1.91
MMP28-203ENST00000612672 RNF135Q8IUD6 432 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms