RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 USP49Q70CQ1 688 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 UBE2Q1Q7Z7E8 422 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 CABP7Q86V35 215 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 IGSF22Q8N9C0 903 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
PRKN-210ENST00000612540 SLAIN1Q8ND83 568 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 COPS5Q92905 334 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 EPSTI1Q96J88 318 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 MLXIPQ9HAP2 919 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
PRKN-210ENST00000612540 DDX41Q9UJV9 622 aaKnown RBP14.42□□□□□ -0.1
PRKN-210ENST00000612540 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 EML1O00423 815 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 DHX15O43143 795 aaKnown RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 MBD3O95983 291 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 GH1P01241 217 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 HMGCRP04035 888 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 PFKFB1P16118 471 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 CNGA1P29973 690 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 CCT6AP40227 531 aaKnown RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 JAK3P52333 1124 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 SPIRE1Q08AE8 756 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 TRIM32Q13049 653 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 PDIA5Q14554 519 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 HAUS3Q68CZ6 603 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 DHX37Q8IY37 1157 aaKnown RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 PDILTQ8N807 584 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 SENP7Q9BQF6 1050 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 RNF208Q9H0X6 261 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 BCAS3Q9H6U6 928 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
PRKN-210ENST00000612540 RANBP2P49792 3224 aaKnown RBP14.41□□□□□ -0.1
PRKN-210ENST00000612540 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 WDR64B1ANS9 1081 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 NOP56O00567 594 aaKnown RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 FARP2O94887 1054 aaPredicted RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 ZNF865P0CJ78 1059 aaPredicted RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 LIG1P18858 919 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 CYP4A11Q02928 519 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 TNFAIP2Q03169 654 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 CELF3Q5SZQ8 465 aaKnown RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 ZNF746Q6NUN9 644 aaPredicted RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 PXYLP1Q8TE99 480 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 CALML4Q96GE6 196 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 SPATA33Q96N06 139 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 PLIN2Q99541 437 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 PANK2Q9BZ23 570 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 CCDC39Q9UFE4 941 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 KCNH3Q9ULD8 1083 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 FAM184BQ9ULE4 1060 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 COLQQ9Y215 455 aaPredicted RBP14.4□□□□□ -0.1
PRKN-210ENST00000612540 STK24Q9Y6E0 443 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
PRKN-210ENST00000612540 H0YGN5 161 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 BACH1O14867 736 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRKN-210ENST00000612540 CCNE2O96020 404 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 CYBAP13498 195 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 SMPD1P17405 629 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 PTGS1P23219 599 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 SFNP31947 248 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 SYKP43405 635 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 FXR1P51114 621 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRKN-210ENST00000612540 NDUFA8P51970 172 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 ACTR2P61160 394 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
PRKN-210ENST00000612540 KARSQ15046 597 aaKnown RBP14.39□□□□□ -0.11
PRKN-210ENST00000612540 EPHA7Q15375 998 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 TMEM63BQ5T3F8 832 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 METTL7BQ6UX53 244 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 TRPV1Q8NER1 839 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
PRKN-210ENST00000612540 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
PRKN-210ENST00000612540 DHX58Q96C10 678 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 EIF2AK1Q9BQI3 630 aaKnown RBP14.39□□□□□ -0.11
PRKN-210ENST00000612540 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 NRBP1Q9UHY1 535 aa14.39□□□□□ -0.11
PRKN-210ENST00000612540 POTEB3A0JP26 581 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 POLR2DO15514 142 aaKnown RBP14.38□□□□□ -0.11
PRKN-210ENST00000612540 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
PRKN-210ENST00000612540 INHAP05111 366 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 PSAPP07602 524 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 AKR1A1P14550 325 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 PLCG1P19174 1290 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 STAT6P42226 847 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
PRKN-210ENST00000612540 RRAGBQ5VZM2 374 aa14.38□□□□□ -0.11
PRKN-210ENST00000612540 MIS18BP1Q6P0N0 1132 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms