RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 HOXD13P35453 343 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 RASSF7Q02833 373 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 KIF5AQ12840 1032 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 CTTNQ14247 550 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 FAM83BQ5T0W9 1011 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 KCTD10Q9H3F6 313 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 PDE11AQ9HCR9 933 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 A0A1W2PQJ5 194 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 PLSCR1O15162 318 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 SEMA3FQ13275 785 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 SPA17Q15506 151 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 EZH2Q15910 746 aaKnown RBP15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 NEK11Q8NG66 645 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 SECISBP2LQ93073 1101 aaKnown RBP15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 PLEKHA4Q9H4M7 779 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 PPP1R2P41236 205 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 USP11P51784 963 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 ADAM9Q13443 819 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 GIT2Q14161 759 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 HYIQ5T013 277 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 NFRKBQ6P4R8 1299 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 CCDC65Q8IXS2 484 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 NT5C3AQ9H0P0 336 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 FBXO28Q9NVF7 368 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 SERPINA10Q9UK55 444 aa15.57■□□□□ 0.08
PCDHGA3-202ENST00000612467 ZNF76P36508 570 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 DGKZQ13574 1117 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PTPROQ16827 1216 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 FIGNQ5HY92 759 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 HGSNATQ68CP4 663 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PDXDC1Q6P996 788 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 CAGE1Q8TC20 777 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 C7orf43Q8WVR3 580 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 KDM3AQ9Y4C1 1321 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 ZNF646O15015 1829 aaPredicted RBP15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 CLIC2O15247 247 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PHACTR2O75167 634 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 MYBL2P10244 700 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PSMD2Q13200 908 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 WDR18Q9BV38 432 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 UBXN6Q9BZV1 441 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 PKD2L1Q9P0L9 805 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 RAB21Q9UL25 225 aa15.56■□□□□ 0.08
PCDHGA3-202ENST00000612467 CYP3A7-CYP3A51PA0A087WV96 503 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 CYP3A7P24462 503 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 NR2F2P24468 414 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 CASP4P49662 377 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 BRD3Q15059 726 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 MBOAT7Q96N66 472 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 TMEM39BQ9GZU3 492 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 ZNF277Q9NRM2 450 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 MAGEA1P43355 309 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 RAPGEF1Q13905 1077 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 FAM133AQ8N9E0 248 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 HDAC7Q8WUI4 952 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 PURBQ96QR8 312 aaKnown RBP15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 SH2D4AQ9H788 454 aa15.55■□□□□ 0.08
PCDHGA3-202ENST00000612467 SHTN1A0MZ66 631 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 SLC9A1P19634 815 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 SREBF1P36956 1147 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 TRMT1LQ7Z2T5 733 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 VAV3Q9UKW4 847 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 L1RE1Q9UN81 338 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 MAP2K7O14733 419 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 HNRNPH3P31942 346 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 EN1Q05925 392 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 TRIM59Q8IWR1 403 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 GMCL1P1Q8NEA9 526 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 GMCL1Q96IK5 515 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 LRRC27Q9C0I9 530 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 PACSIN2Q9UNF0 486 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
PCDHGA3-202ENST00000612467 FGFR1OPO95684 399 aaKnown RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 AP3B2Q13367 1082 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 DCAF17Q5H9S7 520 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 STYK1Q6J9G0 422 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 TPH2Q8IWU9 490 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 SLFN12Q8IYM2 578 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 AJAP1Q9UKB5 411 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 DNM3Q9UQ16 869 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 BCS1LQ9Y276 419 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms