RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 GLIS3Q8NEA6 775 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 JAKMIP2Q96AA8 810 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 TBC1D7Q9P0N9 293 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ROBO3Q96MS0 1386 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 KLRF2D3W0D1 207 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 H0YIN7 160 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 EPHB6O15197 1021 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 VCAM1P19320 739 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ZNF394Q53GI3 561 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 NOC4LQ9BVI4 516 aaKnown RBP11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 MLXIPQ9HAP2 919 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 EXOC1Q9NV70 894 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ITIH6Q6UXX5 1313 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 H7C1D1 291 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 USP8P40818 1118 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 ABL2P42684 1182 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 AMPD2Q01433 879 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 USP4Q13107 963 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 STIM1Q13586 685 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 ARL6IP4Q66PJ3 421 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 LSM14AQ8ND56 463 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 WDR66Q8TBY9 1149 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 CCDC51Q96ER9 411 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 DHRS1Q96LJ7 313 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 NHEJ1Q9H9Q4 299 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 MCM8Q9UJA3 840 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TPX2Q9ULW0 747 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 GRAPQ13588 217 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 PTPROQ16827 1216 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 CCDC70Q6NSX1 233 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 NACA2Q9H009 215 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 MMRN2Q9H8L6 949 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 POTEMA6NI47 508 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 F8VZ95 297 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 RASA1P20936 1047 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 APBA1Q02410 837 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 PRPF4BQ13523 1007 aaKnown RBP11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 DBN1Q16643 649 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TTI2Q6NXR4 508 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 COA7Q96BR5 231 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 AGBL1Q96MI9 1066 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 PIGSQ96S52 555 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 FAM204AQ9H8W3 233 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TCP11L1Q9NUJ3 509 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 TMEM98Q9Y2Y6 226 aa11.78□□□□□ -0.52
PCDHGC3-202ENST00000611950 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 STXBP3O00186 592 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 NCK2O43639 380 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 IVLP07476 585 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 GJA8P48165 433 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 SPATA21Q7Z572 469 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 UHMK1Q8TAS1 419 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 ITM2BQ9Y287 266 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 NAV1Q8NEY1 1877 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 NFKBIEO00221 500 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 MAGEA10P43363 369 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 RNASE9P60153 205 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 PPP4CP60510 307 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 ARID5AQ03989 594 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 PICALMQ13492 652 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 TBCKQ8TEA7 893 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 N4BP2L2Q92802 583 aaPredicted RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 TRIM9Q9C026 710 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 TANGO6Q9C0B7 1094 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 LEMD3Q9Y2U8 911 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
PCDHGC3-202ENST00000611950 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 PALM3A6NDB9 673 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms