RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NFS1Q9Y697 457 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 BACH1O14867 736 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 FLT3P36888 993 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 PTK2Q05397 1052 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 RPS6KA1Q15418 735 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 ASIC2Q16515 512 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 MICALCLQ6ZW33 695 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 MARCH10Q8NA82 808 aaPredicted RBP16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 MYCBPQ99417 103 aaPredicted RBP16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 KCNQ2O43526 872 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 CEP104O60308 925 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 CLSTN1O94985 981 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 TMOD1P28289 359 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 ZNF844Q08AG5 666 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 PDIA5Q14554 519 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 SLC10A5Q5PT55 438 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 YTHDF3Q7Z739 585 aaKnown RBP16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 TAF4BQ92750 862 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 CYFIP2Q96F07 1278 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 AIPL1Q9NZN9 384 aa16.59■□□□□ 0.25
PCDHGB1-202ENST00000611598 ESYT2A0FGR8 921 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 KIF4AO95239 1232 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 USP8P40818 1118 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 ADCY7P51828 1080 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 DDB1Q16531 1140 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 SPRED3Q2MJR0 410 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 ZNF571Q7Z3V5 609 aaPredicted RBP16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 CCDC91Q7Z6B0 441 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 CCDC13Q8IYE1 715 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 NAV1Q8NEY1 1877 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 HAS1Q92839 578 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 RAB34Q9BZG1 259 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 DDX47Q9H0S4 455 aaKnown RBP16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 CD248Q9HCU0 757 aa16.58■□□□□ 0.25
PCDHGB1-202ENST00000611598 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 E9PMD0 336 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 BAG3O95817 575 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 MYZAPP0CAP1 466 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 QPCTQ16769 361 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 C16orf86Q6ZW13 317 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRRC4CQ9HCJ2 640 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 SLC12A6Q9UHW9 1150 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.24
PCDHGB1-202ENST00000611598 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 CTNNA1P35221 906 aaKnown RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 NT5C2P49902 561 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 USP11P51784 963 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 ACTN3Q08043 901 aaPredicted RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 C6orf89Q6UWU4 347 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 SCFD2Q8WU76 684 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 SCFD1Q8WVM8 642 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 RIOX1Q9H6W3 641 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 ITGA4P13612 1032 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 SLC9A1P19634 815 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 KCNH2Q12809 1159 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 FOXR2Q6PJQ5 311 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 KCTD10Q9H3F6 313 aa16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
PCDHGB1-202ENST00000611598 PDHBP11177 359 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 EPS15P42566 896 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 GSCP56915 257 aaPredicted RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 PPP4CP60510 307 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 IRF2BP2Q7Z5L9 587 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRRC47Q8N1G4 583 aaKnown RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRRC57Q8N9N7 239 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 BTDP43251 543 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 HERC4Q5GLZ8 1057 aaPredicted RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRIG3Q6UXM1 1119 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 UBLCP1Q8WVY7 318 aaPredicted RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 DDX25Q9UHL0 483 aaKnown RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 NOC2LQ9Y3T9 749 aaKnown RBP16.56■□□□□ 0.24
PCDHGB1-202ENST00000611598 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms