RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 UBE2OQ9C0C9 1292 aaKnown RBP8.45□□□□□ -1.06
LMBR1-221ENST00000609774 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 ZSWIM4Q9H7M6 989 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 CABP5Q9NP86 173 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 TOMM22Q9NS69 142 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
LMBR1-221ENST00000609774 ZSWIM5Q9P217 1185 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 GJD2Q9UKL4 321 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 JAG2Q9Y219 1238 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 LUC7L2Q9Y383 392 aaKnown RBP8.45□□□□□ -1.06
LMBR1-221ENST00000609774 SAR1BQ9Y6B6 198 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 EPN1Q9Y6I3 576 aaPredicted RBP8.45□□□□□ -1.06
LMBR1-221ENST00000609774 LOC285556D6RIA3 1793 aa8.45□□□□□ -1.06
LMBR1-221ENST00000609774 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 KCNJ18B7U540 433 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 GOLGA8KD6RF30 607 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 TNPO2O14787 897 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 USO1O60763 962 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 PDE8BO95263 885 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 XRCC5P13010 732 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 CALML3P27482 149 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 KRT9P35527 623 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 LONP1P36776 959 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 MCAMP43121 646 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 CACNB3P54284 484 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 CORO7P57737 925 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 APBA1Q02410 837 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 KCNJ12Q14500 433 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 HSP90AA4PQ58FG1 418 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 TCP11X2Q5H9J9 407 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 KLHL10Q6JEL2 608 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 APTXQ7Z2E3 356 aaKnown RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 C7orf61Q8IZ16 206 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 SCYL3Q8IZE3 742 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 FAM76AQ8TAV0 307 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 TRERF1Q96PN7 1200 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 EPC1Q9H2F5 836 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 THAP9Q9H5L6 903 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 FAM204AQ9H8W3 233 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 MAGEF1Q9HAY2 307 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 ZMYND8Q9ULU4 1186 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-221ENST00000609774 CTNND2Q9UQB3 1225 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 PCDHB6Q9Y5E3 794 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 PFASO15067 1338 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 DOCK1Q14185 1865 aa8.44□□□□□ -1.06
LMBR1-221ENST00000609774 MAST2Q6P0Q8 1798 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MYO5AQ9Y4I1 1855 aaKnown RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 BICDL2A1A5D9 508 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 EBAG9O00559 213 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PSMA7O14818 248 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 TEX33O43247 280 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 RNF40O75150 1001 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 DDAH1O94760 285 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MBD4O95243 580 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 NDUFA10O95299 355 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 CPP00450 1065 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 GYPCP04921 128 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PTPRAP18433 802 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 RXRAP19793 462 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 AFMP43652 599 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 GCLCP48506 637 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 DNM2P50570 870 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 GTF2A1P52655 376 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 VSNL1P62760 191 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 UBXN1Q04323 297 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 ITIH3Q06033 890 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PPFIA1Q13136 1202 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MTF1Q14872 753 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 KRT31Q15323 416 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 SPA17Q15506 151 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 SPECC1Q5M775 1068 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 TTC38Q5R3I4 469 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PAPD7Q5XG87 772 aaKnown RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 ICE2Q659A1 982 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 ARL6IP4Q66PJ3 421 aaKnown RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 WWC2Q6AWC2 1192 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MICALCLQ6ZW33 695 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 MIGA2Q7L4E1 593 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 TRAPPC11Q7Z392 1133 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 SPATA5Q8NB90 893 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 COG1Q8WTW3 980 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 NUP133Q8WUM0 1156 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 RUFY1Q96T51 708 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PNKPQ96T60 521 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PHF20Q9BVI0 1012 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 IDI2Q9BXS1 227 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 PIH1D3Q9NQM4 214 aaKnown RBP8.43□□□□□ -1.06
LMBR1-221ENST00000609774 KCNJ14Q9UNX9 436 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 AGTPBP1Q9UPW5 1226 aa8.43□□□□□ -1.06
LMBR1-221ENST00000609774 LTBP2Q14767 1821 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms