RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SORCS3Q9UPU3 1222 aa10.91□□□□□ -0.66
CTCFL-220ENST00000608858 MRVI1Q9Y6F6 885 aa10.91□□□□□ -0.66
CTCFL-220ENST00000608858 RALGAPA2Q2PPJ7 1873 aa10.91□□□□□ -0.66
CTCFL-220ENST00000608858 FRYLO94915 3013 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 SPTBN2O15020 2390 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 TSPY2A6NKD2 308 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 M0R2C6 588 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 STK25O00506 426 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 RANBP6O60518 1105 aaKnown RBP10.9□□□□□ -0.66
CTCFL-220ENST00000608858 PPFIA4O75335 1185 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 DGKIO75912 1065 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 CHRNA1P02708 482 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 WEE2P0C1S8 567 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 SMIM10L2AP0DMW4 78 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 SMIM10L2BP0DMW5 78 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 MYCLP12524 364 aaPredicted RBP10.9□□□□□ -0.66
CTCFL-220ENST00000608858 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
CTCFL-220ENST00000608858 ERVFC1P60507 584 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 MTMR3Q13615 1198 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 ZKSCAN2Q63HK3 967 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 RIN2Q8WYP3 895 aaPredicted RBP10.9□□□□□ -0.66
CTCFL-220ENST00000608858 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
CTCFL-220ENST00000608858 ACACBO00763 2458 aa10.9□□□□□ -0.67
CTCFL-220ENST00000608858 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 C2CD4DB7Z1M9 353 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 H3BRB1 525 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 GPAA1O43292 621 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 RLBP1P12271 317 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 CLCN5P51795 746 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 SP2Q02086 613 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 APOBRQ0VD83 1088 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 SPOUT1Q5T280 376 aaKnown RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 KANK3Q6NY19 840 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 SYCE2Q6PIF2 218 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 UBALD2Q8IYN6 164 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 DTWD2Q8NBA8 298 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 CYP2W1Q8TAV3 490 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 SYTL5Q8TDW5 730 aaPredicted RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 NSUN6Q8TEA1 469 aaKnown RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 DCAF4Q8WV16 495 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 P2RX5Q93086 422 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
CTCFL-220ENST00000608858 TUT1Q9H6E5 874 aaKnown RBP10.89□□□□□ -0.67
CTCFL-220ENST00000608858 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 SMARCA5O60264 1052 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-220ENST00000608858 GGPS1O95749 300 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 NPR3P17342 541 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 PPARAQ07869 468 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 ANKRD54Q6NXT1 300 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 APBB2Q92870 758 aa10.88□□□□□ -0.67
CTCFL-220ENST00000608858 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CTCFL-220ENST00000608858 RC3H2Q9HBD1 1191 aaKnown RBP10.88□□□□□ -0.67
CTCFL-220ENST00000608858 DCDC2BA2VCK2 349 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 RNF113AO15541 343 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 NR3C2P08235 984 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 GOLGA8HP0CJ92 632 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 ARHGAP4P98171 946 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 LPIN1Q14693 890 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 DUSP6Q16828 381 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-220ENST00000608858 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 POMKQ9H5K3 350 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 MLXIPQ9HAP2 919 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 TMEM260Q9NX78 707 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 NR2E1Q9Y466 385 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
CTCFL-220ENST00000608858 CHD8Q9HCK8 2581 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-220ENST00000608858 NAALADL2Q58DX5 795 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 RRP12Q5JTH9 1297 aaKnown RBP10.86□□□□□ -0.67
CTCFL-220ENST00000608858 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
CTCFL-220ENST00000608858 PLPP4Q5VZY2 271 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 RUFY4Q6ZNE9 571 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 C12orf76Q8N812 135 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-220ENST00000608858 APPBP2Q92624 585 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 NAPBQ9H115 298 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 VAT1LQ9HCJ6 419 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 TOMM22Q9NS69 142 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
CTCFL-220ENST00000608858 MAP1BP46821 2468 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms