RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 EPSTI1Q96J88 318 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.222e-13■□□□□ 8.7
CTCFL-218ENST00000608440 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 CNOT10Q9H9A5 744 aaKnown RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 ETNK1Q9HBU6 452 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 INTUQ9ULD6 942 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PTPREP23469 700 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TRIM29Q14134 588 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 STK32AQ8WU08 396 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PBKQ96KB5 322 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
CTCFL-218ENST00000608440 TMEM221A6NGB7 291 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 PEX11AO75192 247 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 HSPD1P10809 573 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 GM2AP17900 193 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 NAT1P18440 290 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 SPAG1Q07617 926 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 GALNTL6Q49A17 601 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 DZIP3Q86Y13 1208 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 NELFBQ8WX92 580 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 INTS9Q9NV88 658 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 SHANK3Q9BYB0 1731 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 BTBD18B2RXH4 712 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 E2F6O75461 281 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 ECHS1P30084 290 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 DDB1Q16531 1140 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 MEA1Q16626 185 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 EXOC3L1Q86VI1 746 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 PIGOQ8TEQ8 1089 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 UTP4Q969X6 686 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 FAM136AQ96C01 138 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 KRT23Q9C075 422 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
CTCFL-218ENST00000608440 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
CTCFL-218ENST00000608440 MYH10P35580 1976 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 SNX3O60493 162 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ATP9AO75110 1047 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 FTCDO95954 541 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
CTCFL-218ENST00000608440 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-218ENST00000608440 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-218ENST00000608440 FITM2Q8N6M3 262 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 MYH7P12883 1935 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 GSTA2P09210 222 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ZCCHC18P0CG32 403 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ALOX15P16050 662 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-218ENST00000608440 CA8P35219 290 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 PAK1Q13153 545 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ASRGL1Q7L266 308 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 TMC4Q7Z404 712 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ZBTB8BQ8NAP8 495 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-218ENST00000608440 TTC8Q8TAM2 541 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 ASAP3Q8TDY4 903 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 MYH13Q9UKX3 1938 aa13.68□□□□□ -0.22
CTCFL-218ENST00000608440 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-218ENST00000608440 KLHDC7AQ5VTJ3 777 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 SUCLG2Q96I99 432 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 ISCUQ9H1K1 167 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-218ENST00000608440 BAG3O95817 575 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 CYP1A1P04798 512 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-218ENST00000608440 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
CTCFL-218ENST00000608440 LRRC14Q15048 493 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms