RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CDK7P50613 346 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 RTP1P59025 263 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 PSMC6P62333 389 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
CTSA-219ENST00000607841 MFSD10Q14728 455 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 CALCRLQ16602 461 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 TTC38Q5R3I4 469 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
CTSA-219ENST00000607841 MIS18BP1Q6P0N0 1132 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 SLC43A3Q8NBI5 491 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 KAT2BQ92831 832 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 GLG1Q92896 1179 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 TNPO1Q92973 898 aaKnown RBP16.11■□□□□ 0.17
CTSA-219ENST00000607841 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 SMARCAD1Q9H4L7 1026 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
CTSA-219ENST00000607841 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 ATP11BQ9Y2G3 1177 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 PCDHA10Q9Y5I2 948 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 TLR3O15455 904 aaKnown RBP16.1■□□□□ 0.17
CTSA-219ENST00000607841 STX6O43752 255 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 PSMD10O75832 226 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 CCNE2O96020 404 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 PSAPP07602 524 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 SFNP31947 248 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 MCM7P33993 719 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 JAK3P52333 1124 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 NBPF20Q3BBV1 942 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 RDM1Q8NG50 284 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 ERAP1Q9NZ08 941 aa16.1■□□□□ 0.17
CTSA-219ENST00000607841 HAS3O00219 553 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 BACH1O14867 736 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 PQBP1O60828 265 aaKnown RBP16.09■□□□□ 0.17
CTSA-219ENST00000607841 LGR5O75473 907 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 SLC26A2P50443 739 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 STAT5BP51692 787 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 TLE2Q04725 743 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 ZNF174Q15697 407 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 FAM47CQ5HY64 1035 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 FAM160B1Q5W0V3 765 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 ABHD15Q6UXT9 468 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 SESTD1Q86VW0 696 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 TELO2Q9Y4R8 837 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 GRIN2DO15399 1336 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
CTSA-219ENST00000607841 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 CHMP2AO43633 222 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 HAS1Q92839 578 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 GJA10Q969M2 543 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 UNC45AQ9H3U1 944 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
CTSA-219ENST00000607841 ZNF302Q9NR11 478 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 DISC1Q9NRI5 854 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 PRKAG2Q9UGJ0 569 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 PCDHA12Q9UN75 941 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
CTSA-219ENST00000607841 MKI67P46013 3256 aaKnown RBP16.08■□□□□ 0.16
CTSA-219ENST00000607841 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 WNT7AO00755 349 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 GNAT1P11488 350 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
CTSA-219ENST00000607841 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 SWSAP1Q6NVH7 229 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 MIER3Q7Z3K6 550 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 AFAP1L1Q8TED9 768 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 MTMR9Q96QG7 549 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
CTSA-219ENST00000607841 TNRC18O15417 2968 aaPredicted RBP16.06■□□□□ 0.16
CTSA-219ENST00000607841 LAD1O00515 517 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 CLTBP09497 229 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 TXKP42681 527 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 PCYT2Q99447 389 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
CTSA-219ENST00000607841 TMEM39AQ9NV64 488 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 GTF2IRD1Q9UHL9 959 aa16.06■□□□□ 0.16
CTSA-219ENST00000607841 VAV3Q9UKW4 847 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms