RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GSTTP1A0A1W2PQM5 241 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 SPDYE3A6NKU9 549 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 TNFRSF10AO00220 468 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 CAND2O75155 1236 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 CHRNA1P02708 482 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 BMP1P13497 986 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 TCF7P36402 384 aaPredicted RBP8.74□□□□□ -1.01
CUX1-219ENST00000606749 ERVK-21P61565 698 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 ARHGAP4P98171 946 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 TFF2Q03403 129 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 GRB10Q13322 594 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 MTMR1Q13613 665 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
CUX1-219ENST00000606749 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 FAM117BQ6P1L5 589 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 TCEANC2Q96MN5 208 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 SUGCTQ9HAC7 445 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 RBM28Q9NW13 759 aaKnown RBP8.74□□□□□ -1.01
CUX1-219ENST00000606749 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 INSL6Q9Y581 213 aa8.74□□□□□ -1.01
CUX1-219ENST00000606749 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
CUX1-219ENST00000606749 TRANK1O15050 2925 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 LINC01553A4QN01 128 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 ZBTB43O43298 467 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 AMHP03971 560 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 CTSHP09668 335 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 HTRA4P83105 476 aaPredicted RBP8.73□□□□□ -1.01
CUX1-219ENST00000606749 RTN1Q16799 776 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 AAK1Q2M2I8 961 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 WWC2Q6AWC2 1192 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 RPAINQ86UA6 219 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 MYOCDQ8IZQ8 938 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 CYP2W1Q8TAV3 490 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 ADAMTS19Q8TE59 1207 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 LMBR1Q8WVP7 490 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 SEPT8Q92599 483 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 TOP1MTQ969P6 601 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 TGS1Q96RS0 853 aaKnown RBP8.73□□□□□ -1.01
CUX1-219ENST00000606749 MXRA8Q9BRK3 442 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 SMARCAD1Q9H4L7 1026 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 RIC8AQ9NPQ8 531 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 KCNH7Q9NS40 1196 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
CUX1-219ENST00000606749 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 PTPRSQ13332 1948 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
CUX1-219ENST00000606749 SPTBN5Q9NRC6 3674 aaKnown RBP8.73□□□□□ -1.01
CUX1-219ENST00000606749 DOCK5Q9H7D0 1870 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 MBLAC1A4D2B0 266 aaPredicted RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 SMCO2A6NFE2 343 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 STXBP3O00186 592 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 CDC45O75419 566 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 FOSP01100 380 aaPredicted RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 MARK3P27448 753 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 CDC27P30260 824 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 NAPAP54920 295 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 KRT32Q14532 448 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 MARCH8Q5T0T0 291 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 TAF2Q6P1X5 1199 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 TEX2Q8IWB9 1127 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 GDPD5Q8WTR4 605 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 APBB2Q92870 758 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 GLG1Q92896 1179 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 KCNB2Q92953 911 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 UHRF1Q96T88 793 aaPredicted RBP8.72□□□□□ -1.01
CUX1-219ENST00000606749 PCYT2Q99447 389 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 EHMT1Q9H9B1 1298 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 BARHL2Q9NY43 387 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 SLC9A2Q9UBY0 812 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 MTUS1Q9ULD2 1270 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 COG5Q9UP83 839 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
CUX1-219ENST00000606749 KLF18A0A0U1RQI7 1052 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 GOLGA8AA7E2F4 631 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 GOLGA8BA8MQT2 603 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 MEIS1O00470 390 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 UPP2O95045 317 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 ARP10275 920 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 CPA1P15085 419 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 ADD1P35611 737 aaKnown RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 CLK2P49760 499 aaKnown RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 KCNQ1P51787 676 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 ADCY7P51828 1080 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 RCAN1P53805 252 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 MGAT3Q09327 533 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 PPFIA1Q13136 1202 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 GRIK4Q16099 956 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 CEP55Q53EZ4 464 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 SP7Q8TDD2 431 aaPredicted RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 DNAJB3Q8WWF6 145 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 HLA-CQ95604 372 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms