RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CCL15Q16663 113 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 KCNK18Q7Z418 384 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 DDX12PQ92771 950 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MGAMO43451 1857 aa13.71□□□□□ -0.21
NEDD8-MDP1-203ENST00000604306 MANSC4A6NHS7 340 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 BTBD19C9JJ37 291 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PDHXO00330 501 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 STRNO43815 780 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SLITRK3O94933 977 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 TGFB3P10600 412 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CYP11B2P19099 503 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ZNF75DP51815 510 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 INHBEP58166 350 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SPAG1Q07617 926 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CST9Q5W186 159 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 MIER3Q7Z3K6 550 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 NCAPG2Q86XI2 1143 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 NOC3LQ8WTT2 800 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 STAMQ92783 540 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GJA10Q969M2 543 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PLIN2Q99541 437 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 TRIM5Q9C035 493 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 DBR1Q9UK59 544 aaKnown RBP13.7□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 A0A087WWV3 80 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 FCER1AP12319 257 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 KCNA2P16389 499 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GAP43P17677 238 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CASP1P29466 404 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PDE4DQ08499 809 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 KCTD2Q14681 263 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ISM2Q6H9L7 571 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 C4orf19Q8IY42 314 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SMCR8Q8TEV9 937 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CTAGE1Q96RT6 745 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SEL1LQ9UBV2 794 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ODF2LQ9ULJ1 636 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 E9PMD0 336 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 AP5Z1O43299 807 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PRCPP42785 496 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 QARSP47897 775 aaKnown RBP13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 HUNKP57058 714 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 IRF5Q13568 498 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GPBP1Q86WP2 473 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 DYDC2Q96IM9 177 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 MMP19Q99542 508 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 LXNQ9BS40 222 aa13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 DIS3Q9Y2L1 958 aaKnown RBP13.68□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ASTN1O14525 1302 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ASB14A6NK59 587 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 RGS20O76081 388 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 CCNE1P24864 410 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 GUCY2CP25092 1073 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PSMC5P62195 406 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 COASYQ13057 564 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 NELFBQ8WX92 580 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 THAP9Q9H5L6 903 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 OLFML3Q9NRN5 406 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ANKEF1Q9NU02 776 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PANK4Q9NVE7 773 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SRCAPQ6ZRS2 3230 aa13.67□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 UBE4BO95155 1302 aa13.66□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 ADGRA2Q96PE1 1338 aa13.66□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
NEDD8-MDP1-203ENST00000604306 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms