RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DPCR1Q3MIW9 517 aa19.42■□□□□ 0.7
PPFIA3-207ENST00000602716 CREBZFQ9NS37 354 aa19.42■□□□□ 0.7
PPFIA3-207ENST00000602716 ADD3Q9UEY8 706 aaKnown RBP19.42■□□□□ 0.7
PPFIA3-207ENST00000602716 E9PMD0 336 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 TM4SF4P48230 202 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 APLP1P51693 650 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 PSMC6P62333 389 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 SP2Q02086 613 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 PDE4DQ08499 809 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 CTTNQ14247 550 aaKnown RBP19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 ELOA2Q8IYF1 753 aaPredicted RBP19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 DYDC2Q96IM9 177 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 KBTBD4Q9NVX7 518 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 MAN1B1Q9UKM7 699 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 KIAA1024Q9UPX6 916 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 ZNF165P49910 485 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 ZNF75DP51815 510 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 INHBEP58166 350 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 GRB14Q14449 540 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 ZNF792Q3KQV3 632 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 NLRX1Q86UT6 975 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 FBXO16Q8IX29 292 aaPredicted RBP19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 RAD54LQ92698 747 aa19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 PYM1Q9BRP8 204 aaKnown RBP19.41■□□□□ 0.7
PPFIA3-207ENST00000602716 SPATA31C2B4DYI2 1134 aa19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 PTGS1P23219 599 aa19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 GTF2F1P35269 517 aaKnown RBP eCLIP19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 SARSP49591 514 aaKnown RBP19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 SPATA20Q8TB22 786 aa19.4■□□□□ 0.7
PPFIA3-207ENST00000602716 KDM3AQ9Y4C1 1321 aa19.39■□□□□ 0.7
PPFIA3-207ENST00000602716 EIF3JO75822 258 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 RPA1P27694 616 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 CTGFP29279 349 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 STX1AQ16623 288 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 DEFB115Q30KQ5 88 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 TMEM63BQ5T3F8 832 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 HAUS3Q68CZ6 603 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 KANK3Q6NY19 840 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 PLEKHH3Q7Z736 793 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 LARP4BQ92615 738 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 HSD17B14Q9BPX1 270 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 ZSWIM8A7E2V4 1837 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 GTPBP6O43824 516 aaPredicted RBP19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 ARIH2O95376 493 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 SP4Q02446 784 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 MTERF4Q7Z6M4 381 aaKnown RBP19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 BANK1Q8NDB2 785 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 ERMNQ8TAM6 284 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 ZFYVE28Q9HCC9 887 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
PPFIA3-207ENST00000602716 ZBTB39O15060 712 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 STAM2O75886 525 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 SLITRK3O94933 977 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 UBA1P22314 1058 aaKnown RBP19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 MAPK4P31152 587 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 NOGQ13253 232 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 UGCGQ16739 394 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 NT5DC1Q5TFE4 455 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 MIER3Q7Z3K6 550 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 ABRAQ8N0Z2 381 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 NPLOC4Q8TAT6 608 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 SMARCE1Q969G3 411 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 DOCK5Q9H7D0 1870 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 KIAA1217Q5T5P2 1943 aa19.38■□□□□ 0.69
PPFIA3-207ENST00000602716 MYMKA6NI61 221 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 GNPTABQ3T906 1256 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 ARMCX2Q7L311 632 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 MORC4Q8TE76 937 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 POLR3CQ9BUI4 534 aaPredicted RBP19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 TRIM5Q9C035 493 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 CUEDC2Q9H467 287 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 TBC1D22BQ9NU19 505 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 HOOK1Q9UJC3 728 aaKnown RBP19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 MCM3APO60318 1980 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 CA12O43570 354 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 KLRC4O43908 158 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 ICAM3P32942 547 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 NLRP12P59046 1061 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 EPHA7Q15375 998 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 TPH2Q8IWU9 490 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 LXNQ9BS40 222 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 TRIM9Q9C026 710 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
PPFIA3-207ENST00000602716 ZNF236Q9UL36 1845 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 CAP1Q01518 475 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 MORC3Q14149 939 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 IQCB1Q15051 598 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 CCDC186Q7Z3E2 898 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 SMYD4Q8IYR2 804 aaPredicted RBP19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 PIGOQ8TEQ8 1089 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 ARHGAP39Q9C0H5 1083 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 NT5C3AQ9H0P0 336 aa19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 ZNFX1Q9P2E3 1918 aaKnown RBP19.36■□□□□ 0.69
PPFIA3-207ENST00000602716 STRNO43815 780 aa19.35■□□□□ 0.69
PPFIA3-207ENST00000602716 SSBP05455 408 aaKnown RBP eCLIP19.35■□□□□ 0.69
PPFIA3-207ENST00000602716 PLA2G4BP0C869 781 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms